RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 POFUT1Q9H488 388 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 MAGIXQ9H6Y5 334 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 IL20Q9NYY1 176 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 KCNG2Q9UJ96 466 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 LYVE1Q9Y5Y7 322 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 NPTNQ9Y639 398 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 LHFPL6Q9Y693 200 aa8.84□□□□□ -0.99
CPSF1-203ENST00000527916 A0A1B0GWJ7 208 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 OR6C68A6NDL8 312 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 B2RBV5 119 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 GPANK1O95872 356 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 DBHP09172 617 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 ZNF12P17014 697 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 CENPAP49450 140 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 TRIM25Q14258 630 aaKnown RBP8.83□□□□□ -1
CPSF1-203ENST00000527916 TMEM155Q4W5P6 130 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 SPRNQ5BIV9 151 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 C9orf139Q6ZV77 190 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 KLHL36Q8N4N3 616 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 SPICQ8N5J4 248 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 OR8G5Q8NG78 346 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 OR2Z1Q8NG97 314 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 OR52E2Q8NGJ4 325 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 OR4K13Q8NH42 304 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 DDOQ99489 341 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 SLC30A2Q9BRI3 323 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 CDADC1Q9BWV3 514 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 RPRD1BQ9NQG5 326 aaKnown RBP8.83□□□□□ -1
CPSF1-203ENST00000527916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
CPSF1-203ENST00000527916 MMP26Q9NRE1 261 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 TMEM106BQ9NUM4 274 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 CYB5R1Q9UHQ9 305 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 POLR1DQ9Y2S0 133 aa8.83□□□□□ -1
CPSF1-203ENST00000527916 POLR3KQ9Y2Y1 108 aaPredicted RBP8.83□□□□□ -1
CPSF1-203ENST00000527916 DOCK11Q5JSL3 2073 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 TCRBV5S2A0A599 114 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 CLPSL1A2RUU4 121 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 FAM181BA6NEQ2 426 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 SLC22A31A6NKX4 558 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 IQCF6A8MYZ5 107 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 TNFRSF11BO00300 401 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 BHLHE40O14503 412 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 FSTL3O95633 263 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 FAM107AO95990 144 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 IGHV2-70P01814 119 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 SELEP16581 610 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 CALB2P22676 271 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 GGT2P36268 569 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 GK3PQ14409 553 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 PDCD1Q15116 288 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 TAF9Q16594 264 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 MEP1BQ16820 701 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 OTPQ5XKR4 325 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 ZNF770Q6IQ21 691 aaPredicted RBP8.82□□□□□ -1
CPSF1-203ENST00000527916 LCN8Q6JVE9 175 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 SLC18B1Q6NT16 456 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 CORO6Q6QEF8 472 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 RASSF6Q6ZTQ3 369 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 RHOUQ7L0Q8 258 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 LRRC28Q86X40 367 aaPredicted RBP8.82□□□□□ -1
CPSF1-203ENST00000527916 OR52L1Q8NGH7 329 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 OR4C15Q8NGM1 316 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 OR2AJ1Q8NGZ0 328 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 OR13G1Q8NGZ3 307 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 ZNF582Q96NG8 517 aaPredicted RBP8.82□□□□□ -1
CPSF1-203ENST00000527916 C1orf21Q9H246 121 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 PPP1R3CQ9UQK1 317 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 INSIG2Q9Y5U4 225 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 CDH10Q9Y6N8 788 aa8.82□□□□□ -1
CPSF1-203ENST00000527916 TRAPPC2LH3BP13 241 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PIN1P1O15428 100 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
CPSF1-203ENST00000527916 CCNB2O95067 398 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 NDUFA7O95182 113 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 GASTP01350 101 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 SBK2P0C263 348 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 ACSM4P0C7M7 580 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PPIAL4GP0DN37 164 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 T-ENOLP0DO92 83 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 ATP6V1B2P21281 511 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
CPSF1-203ENST00000527916 HLXQ14774 488 aaPredicted RBP8.81□□□□□ -1
CPSF1-203ENST00000527916 ZNF181Q2M3W8 571 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 SLC35F1Q5T1Q4 408 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 ASPHD2Q6ICH7 369 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 CYP2R1Q6VVX0 501 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 DHFR2Q86XF0 187 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PARP8Q8N3A8 854 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 LNX2Q8N448 690 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 SDR9C7Q8NEX9 313 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 OR2T4Q8NH00 348 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 ITLN1Q8WWA0 313 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 OR2V2Q96R30 315 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 SIGLEC11Q96RL6 698 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 PITX2Q99697 317 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 ATF6BQ99941 703 aa8.81□□□□□ -1
CPSF1-203ENST00000527916 BTBD10Q9BSF8 475 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms