RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-206	ENST00000527047	ZNF679	Q8IYX0	411 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	ACBD7	Q8N6N7	88 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	ZNF611	Q8N823	705 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	OR10H4	Q8NGA5	316 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	GGH	Q92820	318 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	FBXW5	Q969U6	566 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	SPTSSA	Q969W0	71 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	ZNF799	Q96GE5	643 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	COPS4	Q9BT78	406 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	BCL2L14	Q9BZR8	327 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	NIPAL2	Q9H841	368 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	ELOVL3	Q9HB03	270 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	CNOT2	Q9NZN8	540 aa	Known RBP	10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	EIF3K	Q9UBQ5	218 aa	Known RBP	10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	MRM2	Q9UI43	246 aa	Known RBP	10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	PSORS1C1	Q9UIG5	152 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	POU2F3	Q9UKI9	436 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	GRIP1	Q9Y3R0	1128 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	SPEF1	Q9Y4P9	236 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	LRP12	Q9Y561	859 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	USF3	Q68DE3	2245 aa		10.14	□□□□□ -0.79
PSMD13-206	ENST00000527047	ARID1A	O14497	2285 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	C5orf63	A6NC05	138 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	PSMD9	O00233	223 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	SLC1A7	O00341	560 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	MAGEB4	O15481	346 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	SRSF10	O75494	262 aa	Known RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	SULT1C4	O75897	302 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	H2BFM	P0C1H6	154 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	CCDC159	P0C7I6	412 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	ZNF250	P15622	560 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TUBG1	P23258	451 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	DCK	P27707	260 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	APOBEC3A	P31941	199 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	RGS6	P49758	472 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TPTE	P56180	551 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	ERVS71-1	P61550	626 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	PPP1CB	P62140	327 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	RPS23	P62266	143 aa	Known RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	CSNK2B	P67870	215 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TAF13	Q15543	124 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	MST1L	Q2TV78	715 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	ARL9	Q6T311	187 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	DTX2	Q86UW9	622 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	EGFL6	Q8IUX8	553 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	ABHD4	Q8TB40	342 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	MARS2	Q96GW9	593 aa	Known RBP	10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	CNBD2	Q96M20	576 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TBX5	Q99593	518 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	DOK1	Q99704	481 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	MRO	Q9BYG7	248 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TTTY10	Q9BZA0	68 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	TUBG2	Q9NRH3	451 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	INPP5E	Q9NRR6	644 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	ERVK13-1	Q9NX77	482 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	UBAP1	Q9NZ09	502 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	STARD10	Q9Y365	291 aa		10.13	□□□□□ -0.79
PSMD13-206	ENST00000527047	CHD3	Q12873	2000 aa	Known RBP	10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	IGLV3-9	A0A075B6K5	115 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	TMEM129	A0AVI4	362 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	IRGM	A1A4Y4	181 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	EFCAB10	A6NFE3	127 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047		H3BSA7	217 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	FAM20B	O75063	409 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	CD8A	P01732	235 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	APOC1	P02654	83 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	SOD3	P08294	240 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	OR4A8	P0C604	315 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	LIMS3	P0CW19	117 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	LIMS4	P0CW20	117 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	TTK	P33981	857 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	CX3CR1	P49238	355 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	PRKX	P51817	358 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	ZNF121	P58317	390 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	SLC35A2	P78381	396 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	MVK	Q03426	396 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	GALE	Q14376	348 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	EFNB3	Q15768	340 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	SNAI3	Q3KNW1	292 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	CDON	Q4KMG0	1287 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	TMEM255A	Q5JRV8	349 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	MBNL2	Q5VZF2	373 aa	Known RBP	10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	C11orf71	Q6IPW1	123 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	UNQ6126/PRO20091	Q6UXV3	157 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	KRT77	Q7Z794	578 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	BPIFB6	Q8NFQ5	453 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	OR1J1	Q8NGS3	322 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	SLC25A40	Q8TBP6	338 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	MRPL24	Q96A35	216 aa	Known RBP	10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	COG8	Q96MW5	612 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	SIGLEC11	Q96RL6	698 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	OR51B6	Q9H340	312 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	LIME1	Q9H400	295 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	POFUT1	Q9H488	388 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047		Q9H521	79 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	DUSP21	Q9H596	190 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	UBTD1	Q9HAC8	227 aa		10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.12	□□□□□ -0.79
PSMD13-206	ENST00000527047	FAM206A	Q9NX38	181 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms