RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ERVK13-1Q9NX77 482 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 FZR1Q9UM11 496 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 DIMT1Q9UNQ2 313 aaKnown RBP9.23□□□□□ -0.93
NEDD8-205ENST00000527046 TMEM14AQ9Y6G1 99 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 MAST4O15021 2626 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
NEDD8-205ENST00000527046 E9PI62 339 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF254O75437 659 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 SULT1C4O75897 302 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 IGHV3-13P01766 116 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 H2BFMP0C1H6 154 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 CRHBPP24387 322 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 SERPINF1P36955 418 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 CX3CR1P49238 355 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 MMP16P51512 607 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 TPTEP56180 551 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF121P58317 390 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 GRB2P62993 217 aaKnown RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 SLC35A2P78381 396 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF92Q03936 586 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ST3GAL4Q11206 333 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 GALEQ14376 348 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 GK2Q14410 553 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 IRF3Q14653 427 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 TP53I3Q53FA7 332 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 GLYATL3Q5SZD4 288 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 SPATA46Q5T0L3 261 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 LIPNQ5VXI9 398 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 FBXW12Q6X9E4 464 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ABHD4Q8TB40 342 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 GTF3AQ92664 365 aaKnown RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 SPSB4Q96A44 273 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 HAVCR1Q96D42 359 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 CNBD2Q96M20 576 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 COPS4Q9BT78 406 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
NEDD8-205ENST00000527046 CHD3Q12873 2000 aaKnown RBP9.22□□□□□ -0.93
NEDD8-205ENST00000527046 ITPR2Q14571 2701 aa9.21□□□□□ -0.93
NEDD8-205ENST00000527046 A0A1B0GTI1 187 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 DAPL1A0PJW8 107 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 TRIM64A6NGJ6 449 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 METTL15A6NJ78 407 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 J3QW42 95 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PHYHO14832 338 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 NDUFS7O75251 213 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 FADS2O95864 444 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 LALBAP00709 142 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 TTRP02766 147 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 LCATP04180 440 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 LCKP06239 509 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 DCKP27707 260 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ATP6V1E1P36543 226 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 KIR3DL2P43630 455 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 EVX1P49640 407 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 MMP15P51511 669 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 NANOS3P60323 173 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PSMA6P60900 246 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SPRNQ5BIV9 151 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 OR2G6Q5TZ20 316 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 XAF1Q6GPH4 301 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 RGS7BPQ6MZT1 257 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PAMR1Q6UXH9 720 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 Q6ZR03 302 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 Q6ZSR3 168 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 KRT77Q7Z794 578 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ZCCHC24Q8N2G6 241 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 MUC15Q8N387 334 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PRSS35Q8N3Z0 413 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF283Q8N7M2 679 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 OR2AE1Q8NHA4 323 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 IPCEF1Q8WWN9 437 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SPTSSAQ969W0 71 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 CMBLQ96DG6 245 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PELI1Q96FA3 418 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 TMEM80Q96HE8 168 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 KCNS3Q9BQ31 491 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SYT3Q9BQG1 590 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 MROQ9BYG7 248 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 NIPAL2Q9H841 368 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 CBLN4Q9NTU7 201 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PTTG3PQ9NZH4 202 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 CNOT2Q9NZN8 540 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ERVK-18Q9QC07 812 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 EIF3KQ9UBQ5 218 aaKnown RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ST6GALNAC2Q9UJ37 374 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 POU2F3Q9UKI9 436 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SLC22A13Q9Y226 551 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 PCDHGB1Q9Y5G3 927 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 SIRT4Q9Y6E7 314 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-205ENST00000527046 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 LRBAP50851 2863 aa9.21□□□□□ -0.94
NEDD8-205ENST00000527046 CENPEQ02224 2701 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms