RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 LAMP5Q9UJQ1 280 aa14.73□□□□□ -0.05
LMX1B-203ENST00000526117 IQCF6A8MYZ5 107 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 DLGAP1O14490 977 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 PHYHO14832 338 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 MPZL2O60487 215 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 ZNF254O75437 659 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 LCATP04180 440 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 CD55P08174 381 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 NAT2P11245 290 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 GIFP27352 417 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 NAA10P41227 235 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-203ENST00000526117 PDLIM4P50479 330 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 ZNF81P51508 661 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 MALLQ13021 153 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 CDK5R2Q13319 367 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 TAF13Q15543 124 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 TRIP10Q15642 601 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 KCTD18Q6PI47 426 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-203ENST00000526117 BCDIN3DQ7Z5W3 292 aaKnown RBP14.72□□□□□ -0.05
LMX1B-203ENST00000526117 NAA40Q86UY6 237 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 ZCCHC24Q8N2G6 241 aaKnown RBP14.72□□□□□ -0.05
LMX1B-203ENST00000526117 FAM168AQ92567 244 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 SPSB4Q96A44 273 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 C18orf12Q96KH6 178 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 FAM118AQ9NWS6 357 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 CLN6Q9NWW5 311 aa14.72□□□□□ -0.05
LMX1B-203ENST00000526117 LOC100130705A0A1B0GUX0 176 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 ACOD1A6NK06 481 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 VWC2LB2RUY7 222 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 XRCC2O43543 280 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 TIMM8AO60220 97 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-203ENST00000526117 H2BFMP0C1H6 154 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 SBK2P0C263 348 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 DAOP14920 347 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 GABRB1P18505 474 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 HSD11B1P28845 292 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 SLC6A9P48067 706 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 CX3CR1P49238 355 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-203ENST00000526117 ZIK1Q3SY52 487 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-203ENST00000526117 OGFRL1Q5TC84 451 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-203ENST00000526117 ZNF540Q8NDQ6 660 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 OR52H1Q8NGJ2 320 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 UBASH3BQ8TF42 649 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 THEM6Q8WUY1 208 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 ITFG2Q969R8 447 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 TPK1Q9H3S4 243 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 PTTG3PQ9NZH4 202 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.71□□□□□ -0.05
LMX1B-203ENST00000526117 KLHDC2Q9Y2U9 406 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 GMPPBQ9Y5P6 360 aa14.71□□□□□ -0.05
LMX1B-203ENST00000526117 IGHV4-30-2A0A087WSY4 118 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 A0A096LNT2 108 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 TRIM64A6NGJ6 449 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 TRIM64BA6NI03 449 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 ZSCAN5BA6NJL1 495 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 IGHV1-46P01743 117 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 PSMA6P60900 246 aaKnown RBP14.7□□□□□ -0.06
LMX1B-203ENST00000526117 SNAI3Q3KNW1 292 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 ZNF679Q8IYX0 411 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 OR8G5Q8NG78 346 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 RHOXF1Q8NHV9 184 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 REPIN1Q9BWE0 567 aaKnown RBP14.7□□□□□ -0.06
LMX1B-203ENST00000526117 REG4Q9BYZ8 158 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 ZNF391Q9UJN7 358 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 F8P00451 2351 aa14.7□□□□□ -0.06
LMX1B-203ENST00000526117 ERICH4A6NGS2 130 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 SNTNA6NMZ2 147 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 NCR1O76036 304 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 LY6HO94772 140 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 OR2T7P0C7T2 308 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 ACHEP22303 614 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 CFL1P23528 166 aaKnown RBP14.69□□□□□ -0.06
LMX1B-203ENST00000526117 PEX2P28328 305 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 MAGEB1P43366 347 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 PRKXP51817 358 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 EGR3Q06889 387 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 RIN1Q13671 783 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 HLXQ14774 488 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-203ENST00000526117 ALKBH6Q3KRA9 238 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 PGAP1Q75T13 922 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 BIVMQ86UB2 503 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-203ENST00000526117 SLC35F2Q8IXU6 374 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 ENTHD1Q8IYW4 607 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 ZNF283Q8N7M2 679 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 OR2T27Q8NH04 317 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 RDH5Q92781 318 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 OR8B4Q96RC9 309 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 SLC30A2Q9BRI3 323 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 PIMREGQ9BSJ6 248 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 MROQ9BYG7 248 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 RGCCQ9H4X1 137 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 CHODLQ9H9P2 273 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 DNAJC27Q9NZQ0 273 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 LRP12Q9Y561 859 aa14.69□□□□□ -0.06
LMX1B-203ENST00000526117 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
LMX1B-203ENST00000526117 H7C1Q1 480 aa14.68□□□□□ -0.06
LMX1B-203ENST00000526117 HPXP02790 462 aa14.68□□□□□ -0.06
LMX1B-203ENST00000526117 MRPL3P09001 348 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms