RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CHTOPQ9Y3Y2 248 aaKnown RBP2.85□□□□□ -1.95
CD44-219ENST00000525685 FLVCR1Q9Y5Y0 555 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 CLCA3PQ9Y6N3 262 aa2.85□□□□□ -1.95
CD44-219ENST00000525685 GOLGA4Q13439 2230 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 IGLV3-12A0A075B6K2 115 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 IGHV3-35A0A0C4DH35 117 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 A0A0G2JN53 185 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 FRG2CA6NGY1 282 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 FBLL1A6NHQ2 334 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 ARGFXA6NJG6 315 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 VSTM2BA6NLU5 285 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 KLLNB2CW77 178 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 H0YIV9 168 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SLC17A2O00624 439 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TXNDC9O14530 226 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 COPEO14579 308 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ERI3O43414 337 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 DNAJB6O75190 326 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ALOX12BO75342 701 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SPAG7O75391 227 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 KLF7O75840 302 aaPredicted RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 SUPT7LO94864 414 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NSA2O95478 260 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 PTBP3O95758 552 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 NPPAP01160 153 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SERPIND1P05546 499 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SERPINA6P08185 405 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SMIM10L1P0DMW3 83 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MYL2P10916 166 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TNNI3P19429 210 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 CCNA2P20248 432 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TAC1P20366 129 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 CXCR2P25025 360 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 OTX2P32243 289 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 HAAOP46952 286 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 OR3A4PP47883 348 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 EFNA3P52797 238 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 DSTNP60981 165 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 RPS15P62841 145 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 MRPS15P82914 257 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 IRF8Q02556 426 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 HSF2Q03933 536 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 FAM53BQ14153 422 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NDUFA9Q16795 377 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ADPRMQ3LIE5 342 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 LINC00303Q3SY05 128 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 CCDC153Q494R4 210 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 GGTA1PQ4G0N0 100 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NKAIN1Q4KMZ8 207 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 DEFB134Q4QY38 66 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TNFAIP8L3Q5GJ75 292 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ZNF678Q5SXM1 525 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 AADACL4Q5VUY2 407 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MLIPQ5VWP3 458 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MED27Q6P2C8 311 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 PRMT9Q6P2P2 845 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ZYG11AQ6WRX3 759 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SHISA6Q6ZSJ9 500 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NANOGNBQ7Z5D8 188 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 RAB43Q86YS6 212 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NKAIN4Q8IVV8 208 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 IQCKQ8N0W5 287 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 CA13Q8N1Q1 262 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 RNF175Q8N4F7 328 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TBC1D19Q8N5T2 526 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ZSCAN4Q8NAM6 433 aaPredicted RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 TTLQ8NG68 377 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 OR5T3Q8NGG3 340 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 OR9A4Q8NGU2 314 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 OR2Y1Q8NGV0 311 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TCP10LQ8TDR4 215 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 LZICQ8WZA0 190 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 UBE2E3Q969T4 207 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SGK3Q96BR1 496 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 UPRTQ96BW1 309 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SLC25A36Q96CQ1 311 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MS4A6EQ96DS6 147 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 L3HYPDHQ96EM0 354 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SMIM10Q96HG1 83 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 VSTM2LQ96N03 204 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 GAL3ST1Q99999 423 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 TBCDQ9BTW9 1192 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MS4A8Q9BY19 250 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 YTHDF1Q9BYJ9 559 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 DRC3Q9H069 523 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 SLITRK2Q9H156 845 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 RHBGQ9H310 441 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 WDR54Q9H977 334 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 CRLF2Q9HC73 371 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ANKHQ9HCJ1 492 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 MEPEQ9NQ76 525 aaPredicted RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 SLC17A7Q9P2U7 560 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 EXTL2Q9UBQ6 330 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ZNF282Q9UDV7 671 aaPredicted RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 DCDC2Q9UHG0 476 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 ZNF225Q9UK10 706 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 NXT1Q9UKK6 140 aaKnown RBP2.84□□□□□ -1.95
CD44-219ENST00000525685 CLEC4AQ9UMR7 237 aa2.84□□□□□ -1.95
CD44-219ENST00000525685 EIF3LQ9Y262 564 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms