RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 GCM1Q9NP62 436 aa15.65■□□□□ 0.1
CAPN1-203ENST00000525013 TMEM100Q9NV29 134 aa15.65■□□□□ 0.1
CAPN1-203ENST00000525013 LOC105371242A0A075B767 164 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 RIIAD1A6NNX1 92 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 IQCF6A8MYZ5 107 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 H0YL77 283 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 M0R135 149 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 GNGT2O14610 69 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 SPARCP09486 303 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 SRP9P49458 86 aaKnown RBP15.64■□□□□ 0.09
CAPN1-203ENST00000525013 BTG1P62324 171 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 GK2Q14410 553 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-203ENST00000525013 ZMYND11Q15326 602 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 TAF13Q15543 124 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 TRPM8Q7Z2W7 1104 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 DCXRQ7Z4W1 244 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 ADGRG5Q8IZF4 528 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF511Q8NB15 262 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 OR10S1Q8NGN2 331 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 OR6K6Q8NGW6 343 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 TEX47Q8TBZ9 253 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 GIPC3Q8TF64 312 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 SLCO4A1Q96BD0 722 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF799Q96GE5 643 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 MEGF10Q96KG7 1140 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 SLC30A2Q9BRI3 323 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 COMMD3-BMI1R4GMX3 469 aa15.64■□□□□ 0.09
CAPN1-203ENST00000525013 F5H5P2 479 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 H3BN98 237 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 ACOT8O14734 319 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 GYG2O15488 501 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 AVPP01185 164 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 HLA-DPB1P04440 258 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 SPI1P17947 270 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 MMP16P51512 607 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 SLC25A1P53007 311 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 C1orf229Q6ZS94 237 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-203ENST00000525013 PGAP1Q75T13 922 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 MRPL21Q7Z2W9 205 aaKnown RBP15.63■□□□□ 0.09
CAPN1-203ENST00000525013 LRRC28Q86X40 367 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF420Q8TAQ5 688 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-203ENST00000525013 BCAS4Q8TDM0 211 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 CANT1Q8WVQ1 401 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 SPRYD4Q8WW59 207 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-203ENST00000525013 OTULINQ96BN8 352 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 SIGLEC11Q96RL6 698 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 FEVQ99581 238 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 NIPSNAP1Q9BPW8 284 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 COPS4Q9BT78 406 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 CENPMQ9NSP4 180 aa15.63■□□□□ 0.09
CAPN1-203ENST00000525013 DHRS12A0PJE2 317 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 AQP12BA6NM10 295 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 TMEM178BH3BS89 294 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 J3QLI3 93 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 IFNL4K9M1U5 179 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF593O00488 134 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-203ENST00000525013 MLNRO43193 412 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 FOXH1O75593 365 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 RGS9O75916 674 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF205O95201 554 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 CLUP10909 449 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 PSKH1P11801 424 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 ZNF3P17036 446 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 ADRA2CP18825 462 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 MDH2P40926 338 aaKnown RBP15.62■□□□□ 0.09
CAPN1-203ENST00000525013 ENTPD1P49961 510 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 GK3PQ14409 553 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 TMEM155Q4W5P6 130 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 MOGAT3Q86VF5 341 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 AQP12AQ8IXF9 295 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 IQCF1Q8N6M8 205 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 TMPRSS13Q9BYE2 586 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 NMNAT2Q9BZQ4 307 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 C7orf69Q9H7B7 122 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 PATZ1Q9HBE1 687 aaKnown RBP15.62■□□□□ 0.09
CAPN1-203ENST00000525013 DDX28Q9NUL7 540 aaKnown RBP15.62■□□□□ 0.09
CAPN1-203ENST00000525013 N6AMT1Q9Y5N5 214 aa15.62■□□□□ 0.09
CAPN1-203ENST00000525013 E2F6O75461 281 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 CYB5R3P00387 301 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-203ENST00000525013 GATA3P23771 443 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 ZFP36P26651 326 aaKnown RBP15.61■□□□□ 0.09
CAPN1-203ENST00000525013 POU1F1P28069 291 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 PRKXP51817 358 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 DNAL1Q4LDG9 190 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 CD300LDQ6UXZ3 194 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 SPATC1Q76KD6 591 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 SPATA24Q86W54 205 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 MUC20Q8N307 709 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-203ENST00000525013 MED20Q9H944 212 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 CMC2Q9NRP2 79 aa15.61■□□□□ 0.09
CAPN1-203ENST00000525013 PDP1Q9P0J1 537 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-203ENST00000525013 FBN3Q75N90 2809 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 FAM183AA6NL82 134 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 LRRC30A6NM36 301 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 EPHA1P21709 976 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 BLVRAP53004 296 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 FLOT2Q14254 428 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 SNAI3Q3KNW1 292 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 DRAM2Q6UX65 266 aa15.6■□□□□ 0.09
CAPN1-203ENST00000525013 C1QL2Q7Z5L3 287 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms