RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ISL1P61371 349 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 SNRPD2P62316 118 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 GRB2P62993 217 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 RIPK1Q13546 671 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 DOC2BQ14184 412 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 GK2Q14410 553 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 KRTAP27-1Q3LI81 207 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF718Q3SXZ3 478 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 Q5PR19 223 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2G6Q5TZ20 316 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 LIPNQ5VXI9 398 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 TTC23Q5W5X9 447 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 XAF1Q6GPH4 301 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF544Q6NX49 715 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ARL9Q6T311 187 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 C20orf204Q6ZNR8 217 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 Q6ZR03 302 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 AHSA2Q719I0 299 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 SSX8Q7RTT4 187 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 PRSS45Q7RTY3 260 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 MRPL21Q7Z2W9 205 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 DTX2Q86UW9 622 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 COMMD2Q86X83 199 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 KRTAP1-3Q8IUG1 177 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 RDH10Q8IZV5 341 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 CIARTQ8N365 385 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF525Q8N782 197 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZFP41Q8N8Y5 198 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF454Q8N9F8 522 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2Z1Q8NG97 314 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 OR10AD1Q8NGE0 317 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 OR8B12Q8NGG6 310 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 SNX33Q8WV41 574 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 TRUB1Q8WWH5 349 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 GGHQ92820 318 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 RFKQ969G6 155 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 PIGTQ969N2 578 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 APOBEC3DQ96AK3 386 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 HAVCR1Q96D42 359 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 FAM71F1Q96KD3 344 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 LYZL4Q96KX0 146 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 C4orf36Q96KX1 117 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 RDH12Q96NR8 316 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 OR8B4Q96RC9 309 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 SIGLEC11Q96RL6 698 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 C1QTNF5Q9BXJ0 243 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 BCL2L14Q9BZR8 327 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 CXorf56Q9H5V9 222 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 NARFLQ9H6Q4 476 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF442Q9H7R0 627 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 MOV10Q9HCE1 1003 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 DDX28Q9NUL7 540 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 ACOXLQ9NUZ1 547 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 FAIMQ9NVQ4 179 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 TBCCD1Q9NVR7 557 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 FAM206AQ9NX38 181 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 DCAF16Q9NXF7 216 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 CLEC2DQ9UHP7 191 aa3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-202ENST00000524955 HRNRQ86YZ3 2850 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PRR14LQ5THK1 2151 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 GGT3PA6NGU5 568 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 METTL15A6NJ78 407 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 CD300LBA8K4G0 201 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 VSTM5A8MXK1 200 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 F5H5P2 479 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 LOC110117498-PIK3R3F6TDL0 507 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 H0YAE9 185 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 J3QRE1 110 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 M0R233 179 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 P2RY10O00398 339 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MPZL2O60487 215 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SRSF10O75494 262 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 INMTO95050 263 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF205O95201 554 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 LALBAP00709 142 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 IGHV1-46P01743 117 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 IGHV3-13P01766 116 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 TTRP02766 147 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 KRT8P05787 483 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2T7P0C7T2 308 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF250P15622 560 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 CA6P23280 308 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PAX7P23759 505 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 COL8A2P25067 703 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ACKR3P25106 362 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 C21orf33P30042 268 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 VHLP40337 213 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 KIR3DL2P43630 455 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC15A1P46059 708 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RGS6P49758 472 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF81P51508 661 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MMP15P51511 669 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RIDAP52758 137 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SELENOVP59797 346 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 NANOS3P60323 173 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RPS23P62266 143 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms