RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SHISA8B8ZZ34 492 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF217O75362 1048 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 CD74P04233 296 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 HOXB5P09067 269 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 IFI6P09912 130 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 LPAR6P43657 344 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 F2RL1P55085 397 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 DRAM2Q6UX65 266 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 TMEM104Q8NE00 496 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ADAT3Q96EY9 351 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 OR10C1Q96KK4 312 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 NAA11Q9BSU3 229 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 RHOFQ9HBH0 211 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 MED29Q9NX70 200 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SSX5O60225 188 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 SFTA3P0C7M3 94 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 FAM157CP0CG43 387 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 TPT1P13693 172 aaKnown RBP11.75□□□□□ -0.53
CAPN1-202ENST00000524773 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
CAPN1-202ENST00000524773 DHRS7BQ6IAN0 325 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-202ENST00000524773 SLC26A10Q8NG04 563 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 OR5D18Q8NGL1 313 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 AKR1E2Q96JD6 320 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF587Q96SQ5 575 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-202ENST00000524773 DUSP15Q9H1R2 295 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-202ENST00000524773 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 OR52A1Q9UKL2 312 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 C2orf16Q68DN1 1984 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 VSIG8P0DPA2 414 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 PPICP45877 212 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 TEX30Q5JUR7 227 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 SHISA6Q6ZSJ9 500 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
CAPN1-202ENST00000524773 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 RAB19A4D1S5 217 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 SOCS1O15524 211 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 FGF16O43320 207 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 MED6O75586 246 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 TXNDC12O95881 172 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 SFTPBP07988 381 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 IGFBP3P17936 291 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-202ENST00000524773 RAB32Q13637 225 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 HABP2Q14520 560 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-202ENST00000524773 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 OR2A2Q6IF42 318 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 COMMD2Q86X83 199 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 PPP1R3BQ86XI6 285 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 SEMA6DQ8NFY4 1073 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 OR1M1Q8NGA1 313 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 NPRL2Q8WTW4 380 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 AQP3Q92482 292 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 PRRT1Q99946 306 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 NRIP2Q9BQI9 281 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 SLC19A3Q9BZV2 496 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 HHLA2Q9UM44 414 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 PCDHGA1Q9Y5H4 931 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
CAPN1-202ENST00000524773 LDLRAD4O15165 306 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 BGLAPP02818 100 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 GLI4P10075 376 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 CD79AP11912 226 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 ABOP16442 354 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 BCKDHBP21953 392 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 HHEXQ03014 270 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 MICBQ29980 383 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 OOSP2Q86WS3 158 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 OR4K15Q8NH41 348 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 RNF141Q8WVD5 230 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 DMDP11532 3685 aa11.74□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF354AO60765 605 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 GLRA1P23415 457 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 NR0B1P51843 470 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 RPL27P61353 136 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 PEA15Q15121 130 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 ANGPTL5Q86XS5 388 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 STOML3Q8TAV4 291 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 THAP3Q8WTV1 239 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 PHYHIPLQ96FC7 376 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 UQCC2Q9BRT2 126 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 ST6GALNAC5Q9BVH7 336 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 METTL8Q9H825 291 aaKnown RBP11.73□□□□□ -0.53
CAPN1-202ENST00000524773 G6PC2Q9NQR9 355 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 OBP2AQ9NY56 170 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 A0A0A6YYD4 124 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 CLDN4O14493 209 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 TXNL1O43396 289 aa11.73□□□□□ -0.53
CAPN1-202ENST00000524773 SNAPINO95295 136 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms