RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 GEMIN6Q8WXD5 167 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 KIFAP3Q92845 792 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 IFT74Q96LB3 600 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 TPK1Q9H3S4 243 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 RPF2Q9H7B2 306 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 FGF20Q9NP95 211 aaPredicted RBP2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 IKZF2Q9UKS7 526 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 KIAA1257Q9ULG3 409 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 STARD10Q9Y365 291 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 UBIAD1Q9Y5Z9 338 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 PLXNA4Q9HCM2 1894 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 CHD7Q9P2D1 2997 aa2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 DSPP15924 2871 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-222ENST00000520400 OTOGLQ3ZCN5 2332 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 PCNX1Q96RV3 2341 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 GSTTP1A0A1W2PQM5 241 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 F6UB75 175 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 NEMFO60524 1076 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 CLPXO76031 633 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 CCNE2O96020 404 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 GNAO1P09471 354 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 HRH1P35367 487 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 HSD17B2P37059 387 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 NSG1P42857 185 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 ACLYP53396 1101 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 SUCLG1P53597 346 aaKnown RBP2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 STK38Q15208 465 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 TGFBIQ15582 683 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 CHRNA6Q15825 494 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 HSDL1Q3SXM5 330 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 TTLL9Q3SXZ7 439 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 DUX4L9Q6RFH8 374 aaPredicted RBP2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 TMEM107Q6UX40 140 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 ZFP41Q8N8Y5 198 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 C15orf56Q8N910 161 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 RAB3IL1Q8TBN0 382 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 SLC2A14Q8TDB8 520 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 ZFP90Q8TF47 636 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 FAM210BQ96KR6 192 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 GLT1D1Q96MS3 346 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 SDHCQ99643 169 aaPredicted RBP2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 CHAC1Q9BUX1 264 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 TEKT3Q9BXF9 490 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 OR51M1Q9H341 326 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 UBE2ZQ9H832 354 aaPredicted RBP2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 SLC40A1Q9NP59 571 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 TBX21Q9UL17 535 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 PSG8Q9UQ74 426 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 SCN1AP35498 2009 aa2.74□□□□□ -1.97
CTNNA1-222ENST00000520400 RALGAPA2Q2PPJ7 1873 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 SETD2Q9BYW2 2564 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ELP1O95163 1332 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 MN1Q10571 1320 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 PRSS37A4D1T9 235 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 GOLGA8OA6NCC3 632 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 TRIM64CA6NLI5 447 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 GOLGA8NF8WBI6 632 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 H0YHG0 523 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 KMOO15229 486 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ERLIN2O94905 339 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 PABPC4LP0CB38 370 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 HPGDP15428 266 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 MAGP20916 626 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 CCT6AP40227 531 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 AQP2P41181 271 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 SULT1E1P49888 294 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 CCL23P55773 120 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ACTA2P62736 377 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ACTG2P63267 376 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ACTC1P68032 377 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ACTA1P68133 377 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 MRPS22P82650 360 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 LRRC63Q05C16 580 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 PTGES3Q15185 160 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ALKBH6Q3KRA9 238 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 CCDC183Q5T5S1 534 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 DEFB128Q7Z7B8 93 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 CCDC54Q8NEL0 328 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 N4BP2L2Q92802 583 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ZNF396Q96N95 335 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ATP5SQ99766 215 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 MTG1Q9BT17 334 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 MRPL37Q9BZE1 423 aaKnown RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 RACGAP1Q9H0H5 632 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 ZNF302Q9NR11 478 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 PSMC3IPQ9P2W1 217 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 GINS2Q9Y248 185 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 VWA8A3KMH1 1905 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 KMT2EQ8IZD2 1858 aa2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 KIF26AQ9ULI4 1882 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-222ENST00000520400 SPG11Q96JI7 2443 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 IGLV3-16A0A075B6K0 115 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 H0Y8G0 127 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 AP3B1O00203 1094 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 EIF3HO15372 352 aaKnown RBP eCLIP2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 CLIC3O95833 236 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 RETP07949 1114 aa2.72□□□□□ -1.97
CTNNA1-222ENST00000520400 PNMA6AP0CW24 399 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms