RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 RASSF6Q6ZTQ3 369 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 IL17RELQ6ZVW7 336 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 LINC00471Q8N535 108 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 GJC3Q8NFK1 279 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 SLC26A10Q8NG04 563 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 OR2T29Q8NH02 315 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 SNX33Q8WV41 574 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 NUDT16L1Q9BRJ7 211 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 THTPAQ9BU02 230 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 PLA2G12AQ9BZM1 189 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 MUC13Q9H3R2 512 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 NARFLQ9H6Q4 476 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 MSL2Q9HCI7 577 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 RPRD1BQ9NQG5 326 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 MRPL22Q9NWU5 206 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 LPAR3Q9UBY5 353 aa7.93□□□□□ -1.14
HDAC3-215ENST00000519474 TMEFF2Q9UIK5 374 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 PRPF19Q9UMS4 504 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 SONP18583 2426 aaKnown RBP7.93□□□□□ -1.14
HDAC3-215ENST00000519474 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 A0A1B0GWJ7 208 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 B4DSR2 109 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 H3BSA7 217 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CLN5O75503 358 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CCNB2O95067 398 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 MT-ND5P03915 603 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CD55P08174 381 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 PRKACAP17612 351 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 KITLGP21583 273 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 THBS2P35442 1172 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 GGT2P36268 569 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 DVL1P1P54792 670 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 MVKQ03426 396 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 HNRNPA0Q13151 305 aaKnown RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 KRTAP27-1Q3LI81 207 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 FAM98BQ52LJ0 330 aaKnown RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CLEC12AQ5QGZ9 265 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 AVPI1Q5T686 147 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 SLC18B1Q6NT16 456 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 DNM1P34Q6PK57 102 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 COLCA1Q6ZS62 124 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 TRPM8Q7Z2W7 1104 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 AKAP14Q86UN6 197 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 STX12Q86Y82 276 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CYB561A3Q8NBI2 242 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 SDR9C7Q8NEX9 313 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 OR8D4Q8NGM9 314 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 FANK1Q8TC84 345 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CANT1Q8WVQ1 401 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CCL17Q92583 94 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 SLC7A6OSQ96CW6 309 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 DCLRE1CQ96SD1 692 aaKnown RBP7.92□□□□□ -1.14
HDAC3-215ENST00000519474 C9orf16Q9BUW7 83 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CHID1Q9BWS9 393 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 TSSK6Q9BXA6 273 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 FN3KQ9H479 309 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 C12orf4Q9NQ89 552 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CYSLTR2Q9NS75 346 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 CYB5R1Q9UHQ9 305 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 ZDHHC8Q9ULC8 765 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 WIPI2Q9Y4P8 454 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 U3KQV3 271 aa7.92□□□□□ -1.14
HDAC3-215ENST00000519474 PLSCR5A0PG75 271 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 ACOD1A6NK06 481 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 NOTOA8MTQ0 251 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 TIMM8AO60220 97 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 RAP2AP10114 183 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 PYCR1P32322 319 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 ERFP50548 548 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 CSNK2BP67870 215 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 HLXQ14774 488 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 HFEQ30201 348 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 SLC36A3Q495N2 470 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 FBXW12Q6X9E4 464 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 TMEM179BQ7Z7N9 219 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 LINC00346Q8IVM7 164 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 ADGRG5Q8IZF4 528 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 LNX2Q8N448 690 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 AQP11Q8NBQ7 271 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 OR10S1Q8NGN2 331 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 OR4Q3Q8NH05 313 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 POP5Q969H6 163 aaKnown RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 ASB9Q96DX5 294 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 ELMOD3Q96FG2 381 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 MAP6Q96JE9 813 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 DIRC2Q96SL1 478 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 NIPSNAP1Q9BPW8 284 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 CDADC1Q9BWV3 514 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 C1QTNF5Q9BXJ0 243 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 DGCR6LQ9BY27 220 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 NMNAT2Q9BZQ4 307 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 SAP30LQ9HAJ7 183 aa7.91□□□□□ -1.14
HDAC3-215ENST00000519474 PNRC2Q9NPJ4 139 aaKnown RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 SAMHD1Q9Y3Z3 626 aaKnown RBP7.91□□□□□ -1.14
HDAC3-215ENST00000519474 CDH10Q9Y6N8 788 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms