RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 HIST2H3PS2Q5TEC6 136 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 TMEM244Q5VVB8 128 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 HIST2H3AQ71DI3 136 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
CLN8-204ENST00000519254 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 ZNF671Q8TAW3 534 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 WNT2BQ93097 391 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 GMPPAQ96IJ6 420 aaPredicted RBP12.7□□□□□ -0.38
CLN8-204ENST00000519254 NIPAL2Q9H841 368 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 SH3BGRL2Q9UJC5 107 aa12.7□□□□□ -0.38
CLN8-204ENST00000519254 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ANXA2P2A6NMY6 339 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 PRRG2O14669 202 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 SSX4O60224 188 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 LMX1BO60663 402 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 HLA-DQB1P01920 261 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ANXA2P07355 339 aaKnown RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 UBCP0CG48 685 aaKnown RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 GABRA1P14867 456 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 IGFBP3P17936 291 aaPredicted RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 HSD11B1P28845 292 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 TALDO1P37837 337 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 PITPNBP48739 271 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 BCAP31P51572 246 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 PRKXP51817 358 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 PER3P56645 1201 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CLDN12P56749 244 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 SF3B4Q15427 424 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLN8-204ENST00000519254 TAF13Q15543 124 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 C1orf185Q5T7R7 199 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 FAM27BQ5VT28 67 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 LRRC18Q8N456 261 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 RPRMLQ8N4K4 120 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CNEP1R1Q8N9A8 125 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 OR13C3Q8NGS6 347 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CMTM3Q96MX0 182 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CRLF2Q9HC73 371 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 OR5V1Q9UGF6 321 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 ARHGAP21Q5T5U3 1957 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 TPRP12270 2363 aaKnown RBP12.69□□□□□ -0.38
CLN8-204ENST00000519254 PFDN1O60925 122 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CD2P06729 351 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 FSTP19883 344 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ANOS1P23352 680 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CTSSP25774 331 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 RFX2P48378 723 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ASAH1Q13510 395 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 UBE2NLQ5JXB2 153 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 TSPO2Q5TGU0 170 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 GJC3Q8NFK1 279 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 CPT1CQ8TCG5 803 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 FBXO17Q96EF6 278 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 ABHD1Q96SE0 405 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 SLCO5A1Q9H2Y9 848 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 TINAGQ9UJW2 476 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 FOXJ3Q9UPW0 622 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 FAM215AQ9Y5M1 114 aa12.69□□□□□ -0.38
CLN8-204ENST00000519254 TLN1Q9Y490 2541 aaKnown RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 GTF3C1Q12789 2109 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 A0A1B0GTI1 187 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 LINC00854A0A1B0GVQ3 168 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 PLA2G10O15496 165 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 SS18L1O75177 396 aaPredicted RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 CALCBP10092 127 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 CFPP27918 469 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 ZNF121P58317 390 aaPredicted RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 GRB2P62993 217 aaKnown RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 RBPJQ06330 500 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 RSPO1Q2MKA7 263 aaPredicted RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 CCDC92Q53HC0 331 aaPredicted RBP12.68□□□□□ -0.38
CLN8-204ENST00000519254 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 WACQ9BTA9 647 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 GPR35Q9HC97 309 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 GP6Q9HCN6 339 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 GLRX2Q9NS18 164 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 SLC7A10Q9NS82 523 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 TMEM38BQ9NVV0 291 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 TAS2R4Q9NYW5 299 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 ZNF319Q9P2F9 582 aa12.68□□□□□ -0.38
CLN8-204ENST00000519254 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 CD37P11049 281 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 SLC2A1P11166 492 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 EDN3P14138 238 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 PTGER4P35408 488 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 CX3CR1P49238 355 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 C9orf135Q5VTT2 229 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 OR2A2Q6IF42 318 aa12.67□□□□□ -0.38
CLN8-204ENST00000519254 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
CLN8-204ENST00000519254 SEM1Q6ZVN7 128 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms