RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RSG1Q9BU20 258 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 UCK2Q9BZX2 261 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 TMEM27Q9HBJ8 222 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 MRPS30Q9NP92 439 aaKnown RBP2.49□□□□□ -2.01
SQLE-202ENST00000518604 PTTG3PQ9NZH4 202 aa2.49□□□□□ -2.01
SQLE-202ENST00000518604 IGHV3OR16-9A0A0B4J2B5 98 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 CENPVL3A0A0U1RRI6 287 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 TSPAN11A1L157 253 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 SYCE1LA8MT33 242 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 M0R3G1 203 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 TAAR5O14804 337 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 HLA-HP01893 362 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 IL4P05112 153 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 TPM2P07951 284 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 CLTAP09496 248 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 RAB4AP20338 218 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 HTR1DP28221 377 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 GFERP55789 205 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 CACNG7P62955 275 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 CDK5Q00535 292 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 NKAIN4Q8IVV8 208 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 SNX31Q8N9S9 440 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 OR51E1Q8TCB6 317 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 SLC25A46Q96AG3 418 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 JSRP1Q96MG2 331 aaPredicted RBP2.48□□□□□ -2.01
SQLE-202ENST00000518604 RNF145Q96MT1 663 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 FOXC2Q99958 501 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 BPIFA3Q9BQP9 254 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 CALN1Q9BXU9 219 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 MYOZ1Q9NP98 299 aaPredicted RBP2.48□□□□□ -2.01
SQLE-202ENST00000518604 CCNB1IP1Q9NPC3 277 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 S4R3C0 116 aa2.48□□□□□ -2.01
SQLE-202ENST00000518604 IGHV1-69DA0A0B4J2H0 117 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 IGKV1-8A0A0C4DH67 115 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 RPL36A-HNRNPH2H7BZ11 118 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 SLC9A3R1O14745 358 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 NVLO15381 856 aaKnown RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 CHMP2AO43633 222 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 IGLV3-19P01714 112 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 CSNK2A2P19784 350 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 GSTM3P21266 225 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 RPL23P62829 140 aaKnown RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 PITPNAQ00169 270 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 DGCR6Q14129 220 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 SLC25A34Q6PIV7 304 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 C12orf54Q6X4T0 127 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 APRG1Q8IVJ8 170 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 MICU2Q8IYU8 434 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 OSR2Q8N2R0 312 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 TMEM256Q8N2U0 113 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 CSGALNACT2Q8N6G5 542 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 CIRBP-AS1Q8TBR5 109 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 RTN4IP1Q8WWV3 396 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 NEURL3Q96EH8 262 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 OPALINQ96PE5 141 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 SULT4A1Q9BR01 284 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 SAMD10Q9BYL1 202 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 FGF23Q9GZV9 251 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 ELOVL6Q9H5J4 265 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 AGPAT4Q9NRZ5 378 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 SLC39A1Q9NY26 324 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 PDP1Q9P0J1 537 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 MARCOQ9UEW3 520 aaPredicted RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 RCL1Q9Y2P8 373 aaKnown RBP2.47□□□□□ -2.01
SQLE-202ENST00000518604 COL1A2P08123 1366 aa2.47□□□□□ -2.01
SQLE-202ENST00000518604 DENND4AQ7Z401 1863 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 IGHV7-4-1A0A0J9YVY3 117 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 KRBOX1C9JBD0 128 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 TNFRSF11BO00300 401 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 EIF1BO60739 113 aaKnown RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 GLSO94925 669 aaPredicted RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 DCNP07585 359 aaKnown RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 USF1P22415 310 aaPredicted RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 MYL9P24844 172 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 PFN2P35080 140 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 TALDO1P37837 337 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 EIF1P41567 113 aaKnown RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 TAS2R31P59538 309 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 UNQ9165/PRO28630Q6UXU0 137 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 HORMAD1Q86X24 394 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 COMMD1Q8N668 190 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 OR52K2Q8NGK3 314 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 OR52P1PQ8NH57 321 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 HAUS1Q96CS2 278 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 RMI2Q96E14 147 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 ZNF317Q96PQ6 595 aaPredicted RBP2.46□□□□□ -2.02
SQLE-202ENST00000518604 GPR21Q99679 349 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 RBBP8Q99708 897 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 TIMM29Q9BSF4 260 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 SLC7A5P2Q9GIP4 190 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 TOLLIPQ9H0E2 274 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 ING2Q9H160 280 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 SLC38A10Q9HBR0 1119 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 WFDC1Q9HC57 220 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 C8orf17Q9NRJ1 99 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 SLC17A7Q9P2U7 560 aa2.46□□□□□ -2.02
SQLE-202ENST00000518604 UBN2Q6ZU65 1347 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms