RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LAMP5Q9UJQ1 280 aa18.75■□□□□ 0.59
VEGFA-217ENST00000518538 KLHDC2Q9Y2U9 406 aa18.75■□□□□ 0.59
VEGFA-217ENST00000518538 NCR1O76036 304 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 APOC1P02654 83 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 HPXP02790 462 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 ADH4P08319 380 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 H2BFMP0C1H6 154 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 CX3CR1P49238 355 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 ZNF283Q8N7M2 679 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 WARS2Q9UGM6 360 aaKnown RBP18.74■□□□□ 0.59
VEGFA-217ENST00000518538 ZDHHC8Q9ULC8 765 aa18.74■□□□□ 0.59
VEGFA-217ENST00000518538 SMAD7O15105 426 aaKnown RBP18.73■□□□□ 0.59
VEGFA-217ENST00000518538 SPRY3O43610 288 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 IGHV1-46P01743 117 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 SELEP16581 610 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 HTR1FP30939 366 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 CCL8P80075 99 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 MRPS11P82912 194 aaKnown RBP18.73■□□□□ 0.59
VEGFA-217ENST00000518538 GK2Q14410 553 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-217ENST00000518538 TRIP10Q15642 601 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 CARTPTQ16568 116 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 SNAI3Q3KNW1 292 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 FAM209AQ5JX71 171 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 ZNF582Q96NG8 517 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-217ENST00000518538 DIRC2Q96SL1 478 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 PIMREGQ9BSJ6 248 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 ADGRL4Q9HBW9 690 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 MSL2Q9HCI7 577 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 TMEM14AQ9Y6G1 99 aa18.73■□□□□ 0.59
VEGFA-217ENST00000518538 VWC2LB2RUY7 222 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 SLC2A1P11166 492 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 HCCSP53701 268 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 OR2T2Q6IF00 324 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 PGAP1Q75T13 922 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-217ENST00000518538 RDH5Q92781 318 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 RFKQ969G6 155 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 RDH12Q96NR8 316 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 MNTQ99583 582 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 SP140LQ9H930 580 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 C8orf4Q9NR00 106 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 DECR2Q9NUI1 292 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 DNAJC27Q9NZQ0 273 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 GMPPBQ9Y5P6 360 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 MED13LQ71F56 2210 aa18.72■□□□□ 0.59
VEGFA-217ENST00000518538 MAP1AP78559 2803 aaPredicted RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 A0A096LNT2 108 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 IQCF6A8MYZ5 107 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 ANOS1P23352 680 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 GIFP27352 417 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 SNRPGP62308 76 aaKnown RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 POU4F2Q12837 409 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 CDK5R2Q13319 367 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 TMED1Q13445 227 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 TSTQ16762 297 aaKnown RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 SLC25A30Q5SVS4 291 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 GLYATL3Q5SZD4 288 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 KCTD18Q6PI47 426 aaPredicted RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 LRRN1Q6UXK5 716 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 Q6ZR03 302 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 MRPL21Q7Z2W9 205 aaKnown RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 BIVMQ86UB2 503 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 SLC35F2Q8IXU6 374 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 OR5AS1Q8N127 324 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 ZNF540Q8NDQ6 660 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 ASB17Q8WXJ9 295 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 UBE2FQ969M7 185 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 NIPAL2Q9H841 368 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 SMPD3Q9NY59 655 aaPredicted RBP18.71■□□□□ 0.59
VEGFA-217ENST00000518538 COPS3Q9UNS2 423 aa18.71■□□□□ 0.59
VEGFA-217ENST00000518538 VPS13CQ709C8 3753 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 C5orf63A6NC05 138 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LYNX1G3V0Z9 82 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 TPD52L2O43399 206 aaKnown RBP18.7■□□□□ 0.58
VEGFA-217ENST00000518538 XRCC2O43543 280 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 ANXA2P07355 339 aaKnown RBP18.7■□□□□ 0.58
VEGFA-217ENST00000518538 CD55P08174 381 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 SBK2P0C263 348 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LYNX1P0DP58 116 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 ACHEP22303 614 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 NR4A2P43354 598 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 ZNF121P58317 390 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-217ENST00000518538 ELF3P78545 371 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LRRC36Q1X8D7 754 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LPCAT4Q643R3 524 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 DEGS2Q6QHC5 323 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 PRSS45Q7RTY3 260 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 KRT77Q7Z794 578 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 OR8G5Q8NG78 346 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 OR51G2Q8NGK0 314 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 OPA3Q9H6K4 179 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 CHODLQ9H9P2 273 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 SAP30LQ9HAJ7 183 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 FAM118AQ9NWS6 357 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 CLN6Q9NWW5 311 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LRP12Q9Y561 859 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 N6AMT1Q9Y5N5 214 aa18.7■□□□□ 0.58
VEGFA-217ENST00000518538 FLNAP21333 2647 aaKnown RBP18.7■□□□□ 0.58
VEGFA-217ENST00000518538 LOC100130705A0A1B0GUX0 176 aa18.69■□□□□ 0.58
VEGFA-217ENST00000518538 PHYHO14832 338 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms