RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 DOK3Q7L591 496 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 OR52N4Q8NGI2 321 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 TNFAIP8L1Q8WVP5 186 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 CA10Q9NS85 328 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 GLTPQ9NZD2 209 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 HS3ST3B1Q9Y662 390 aa13.16□□□□□ -0.3
NUP54-217ENST00000514987 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 LOC101059948A0A1B0GTJ6 334 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 B4E171 279 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 TOXO94900 526 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 APOC1P02654 83 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OPN1LWP04000 364 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 GP1BAP07359 652 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 MSR1P21757 451 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 SDHBP21912 280 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 TSPAN7P41732 249 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CLDN17P56750 224 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OPCMLQ14982 345 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CLVS2Q5SYC1 327 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CARD17Q5XLA6 110 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 FOXL2NBQ6ZUU3 175 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CHMP1BQ7LBR1 199 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 RPS19BP1Q86WX3 136 aaKnown RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 MUC20Q8N307 709 aaPredicted RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 TMEM156Q8N614 296 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 TMEM54Q969K7 222 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 TMEM41AQ96HV5 264 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 EDEM2Q9BV94 578 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 ASH2LQ9UBL3 628 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 DKKL1Q9UK85 242 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR6C65A6NJZ3 312 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 NPIPA2E9PIF3 369 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 NPIPA3F8WFD2 350 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 RAB27BO00194 218 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CBR3O75828 277 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 ICAM2P13598 275 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CX3CR1P49238 355 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 ZNF121P58317 390 aaPredicted RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 MLF1P58340 268 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 FOXK1P85037 733 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 MFAP5Q13361 173 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 GRK1Q15835 563 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 RNASE10Q5GAN6 216 aaKnown RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 SLC23A3Q6PIS1 610 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 BPIFB2Q8N4F0 458 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 OR13C9Q8NGT0 318 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 DVL3Q92997 716 aaPredicted RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 CITED4Q96RK1 184 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 CDCP1Q9H5V8 836 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 PNRC2Q9NPJ4 139 aaKnown RBP13.15□□□□□ -0.3
NUP54-217ENST00000514987 HPF1Q9NWY4 346 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 PLEKHA6Q9Y2H5 1048 aa13.15□□□□□ -0.3
NUP54-217ENST00000514987 TMEM14DPA8MWL7 114 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 MCRIP1C9JLW8 97 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 GSTP1P09211 210 aaKnown RBP13.14□□□□□ -0.31
NUP54-217ENST00000514987 OR4E1P0C645 316 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ZNF735P0CB33 412 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 SSTR2P30874 369 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 CDAP32320 146 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 PRKXP51817 358 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
NUP54-217ENST00000514987 RAC1P63000 192 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
NUP54-217ENST00000514987 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 OR10K2Q6IF99 312 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 LPCAT3Q6P1A2 487 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ABHD12BQ7Z5M8 362 aaPredicted RBP13.14□□□□□ -0.31
NUP54-217ENST00000514987 FJX1Q86VR8 437 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ANGPTL5Q86XS5 388 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 C12orf45Q8N5I9 185 aaPredicted RBP13.14□□□□□ -0.31
NUP54-217ENST00000514987 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ZDHHC22Q8N966 263 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ACBD4Q8NC06 268 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 CHST4Q8NCG5 386 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 ELMOD3Q96FG2 381 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 PIGQQ9BRB3 760 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 NELFAQ9H3P2 528 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 GPR84Q9NQS5 396 aa13.14□□□□□ -0.31
NUP54-217ENST00000514987 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms