RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 HAVCR1Q96D42 359 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 TRIM15Q9C019 465 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 IL1RAPQ9NPH3 570 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 CLN8Q9UBY8 286 aa11.57□□□□□ -0.56
SPCS3-204ENST00000513139 NDRG4Q9ULP0 352 aaKnown RBP11.57□□□□□ -0.56
SPCS3-204ENST00000513139 ERICH4A6NGS2 130 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 ABHD16AO95870 558 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 OPN1MWP04001 364 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 FABP3P05413 133 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 LIPFP07098 398 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 OPN1MW2P0DN77 364 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 OPN1MW3P0DN78 364 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 COX5BP10606 129 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
SPCS3-204ENST00000513139 RUSC1-AS1Q66K80 236 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 SLC25A47Q6Q0C1 308 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 GDPGP1Q6ZNW5 385 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 ZDHHC21Q8IVQ6 265 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 TMEM255BQ8WV15 326 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 GATAD2BQ8WXI9 593 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 CMBLQ96DG6 245 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 PRRC1Q96M27 445 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 COG8Q96MW5 612 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 WACQ9BTA9 647 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 FNDC11Q9BVV2 318 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 NMNAT1Q9HAN9 279 aaPredicted RBP11.56□□□□□ -0.56
SPCS3-204ENST00000513139 INIPQ9NRY2 104 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 AURKCQ9UQB9 309 aa11.56□□□□□ -0.56
SPCS3-204ENST00000513139 FAM32AQ9Y421 112 aaKnown RBP11.56□□□□□ -0.56
SPCS3-204ENST00000513139 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 CENPVL3A0A0U1RRI6 287 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 TCRBV3S1A0A5B6 114 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 LRRC30A6NM36 301 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 KPNA4O00629 521 aaPredicted RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 CIB2O75838 187 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 TSPAN19P0C672 248 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 RHCEP18577 417 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 LAP3P28838 519 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 IER3P46695 156 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 FMODQ06828 376 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 CD47Q08722 323 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 FAM98BQ52LJ0 330 aaKnown RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 TBPL2Q6SJ96 375 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 DCDC5Q6ZRR9 648 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 CYP4Z1Q86W10 505 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 C1orf87Q8N0U7 546 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 OR52J3Q8NH60 311 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 NSMAFQ92636 917 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 HDAC2Q92769 488 aaKnown RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 PTP4A1Q93096 173 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 PPP1R14AQ96A00 147 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 SLCO4A1Q96BD0 722 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 PCGF1Q9BSM1 259 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 POLR2J3Q9H1A7 115 aaKnown RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 POFUT1Q9H488 388 aa11.55□□□□□ -0.56
SPCS3-204ENST00000513139 MEPEQ9NQ76 525 aaPredicted RBP11.55□□□□□ -0.56
SPCS3-204ENST00000513139 C12orf71A8MTZ7 269 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF879B4DU55 563 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 H0YL77 283 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 TSPAN9O75954 239 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 TOX4O94842 621 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF205O95201 554 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
SPCS3-204ENST00000513139 IGF2P01344 180 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 IGHV4-59P01825 116 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 MMP9P14780 707 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 RAC2P15153 192 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 CFHR2P36980 270 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 SRP9P49458 86 aaKnown RBP11.54□□□□□ -0.56
SPCS3-204ENST00000513139 NPY4RP50391 375 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ST3GAL3Q11203 375 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 KPNB1Q14974 876 aaKnown RBP11.54□□□□□ -0.56
SPCS3-204ENST00000513139 TRAM2Q15035 370 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 FAM189A2Q15884 450 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF841Q6ZN19 808 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 Q6ZSV7 163 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 FOXL2NBQ6ZUU3 175 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 OFCC1Q8IZS5 231 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ATG16L2Q8NAA4 619 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 OR13G1Q8NGZ3 307 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 PFN4Q8NHR9 129 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ZNF420Q8TAQ5 688 aaPredicted RBP11.54□□□□□ -0.56
SPCS3-204ENST00000513139 LIPHQ8WWY8 451 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 LRTOMTQ8WZ04 291 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 MEGF10Q96KG7 1140 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 RBP7Q96R05 134 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 DPAGT1Q9H3H5 408 aa11.54□□□□□ -0.56
SPCS3-204ENST00000513139 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms