RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 A0A1W2PRV1 198 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 M0R296 226 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 FCN1O00602 326 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 FABP2P12104 132 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 GP2P55259 537 aaKnown RBP7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 KCNJ10P78508 379 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 CTSL3PQ5NE16 218 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 ABI3BPQ7Z7G0 1075 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 TMEFF1Q8IYR6 380 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 CBARPQ8N350 705 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 ADOQ96SZ5 270 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 LHX3Q9UBR4 397 aa7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 MBD1Q9UIS9 605 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-218ENST00000513024 COL24A1Q17RW2 1714 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 A0A0B4J203 849 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 H7C1C5 153 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 B4GALT3O60512 393 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 FAM87AP0C7U9 286 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CRISP2P16562 243 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 COX5AP20674 150 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 BMP5P22003 454 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 AOAHP28039 575 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 XCR1P46094 333 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR3A1P47881 315 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 MEOX1P50221 254 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CRMP1Q14194 572 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SLC36A2Q495M3 483 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ZNF385BQ569K4 471 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TMEM240Q5SV17 173 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ZNF385CQ66K41 422 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SLC16A14Q7RTX9 510 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PTRH1Q86Y79 214 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR52I1Q8NGK6 324 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SNX22Q96L94 193 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 STARD5Q9NSY2 213 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 LRIT1Q9P2V4 623 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 NOSIPQ9Y314 301 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CEBPBP17676 345 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PSMB5P28074 263 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 BLVRBP30043 206 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TAS2R45P59539 299 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SLC35A2P78381 396 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DEFB103AP81534 67 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 EIF3IQ13347 325 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PDE7AQ13946 482 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 MIDNQ504T8 468 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 HSD11B1LQ7Z5J1 315 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DND1Q8IYX4 353 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 BVESQ8NE79 360 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ASB17Q8WXJ9 295 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PTP4A1Q93096 173 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DDIT4LQ96D03 193 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PECRQ9BY49 303 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 MRPL13Q9BYD1 178 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 MSL2Q9HCI7 577 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DOK5Q9P104 306 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DMRT1Q9Y5R6 373 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 A0A0A6YYC8 382 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TCRBV5S1A1TA0A578 114 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 I3L1I5 382 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR2T7P0C7T2 308 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TBPP20226 339 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ATP1B3P54709 279 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ERVFC1-1P60608 527 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 DGCR2P98153 550 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ZP2Q05996 745 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TMEM184AQ6ZMB5 413 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR5D18Q8NGL1 313 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR2T27Q8NH04 317 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR4A16Q8NH70 328 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 FAM3DQ96BQ1 224 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 TNFRSF13CQ96RJ3 184 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SERINC2Q96SA4 455 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CITED1Q99966 193 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 UTP23Q9BRU9 249 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 WDR83Q9BRX9 315 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 PRR14Q9BWN1 585 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ZNF443Q9Y2A4 671 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 NSG1A0A0A6YYJ2 146 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 FAM155AB1AL88 458 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SGK494L7N484 410 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ISLRO14498 428 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SOX15O60248 233 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 LRP3O75074 770 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 OR7C1O76099 320 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 KIR2DL3P43628 341 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 EVX1P49640 407 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 SRYQ05066 204 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 HLXQ14774 488 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CTU2Q2VPK5 515 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 ANKRD33Q7Z3H0 272 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 LPAR5Q9H1C0 372 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 CHST11Q9NPF2 352 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 WNT16Q9UBV4 365 aa7.97□□□□□ -1.13
LIMCH1-218ENST00000513024 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 OR5K3A6NET4 321 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 WDR1O75083 606 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 HIST1H1TP22492 207 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms