RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 KPTNQ9Y664 436 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 GMEB1Q9Y692 573 aa9.51□□□□□ -0.89
RNF4-216ENST00000511859 A0A1B0GWJ7 208 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 F5H5P2 479 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 PPP1R3DO95685 299 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 NCK1P16333 377 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 FUT1P19526 365 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 MSR1P21757 451 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 EEF1B2P24534 225 aaKnown RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 ERFP50548 548 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 COL10A1Q03692 680 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 CD69Q07108 199 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 SCRN3Q0VDG4 424 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 NPTX1Q15818 432 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 NSUN5P1Q3KNT7 163 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CDONQ4KMG0 1287 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 OR2T2Q6IF00 324 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 FOXL2NBQ6ZUU3 175 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CALHM3Q86XJ0 350 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 PDZD9Q8IXQ8 264 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 KLHDC1Q8N7A1 406 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 OR2T12Q8NG77 320 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 ADAMTS16Q8TE57 1224 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 RASD2Q96D21 266 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 R3HDM4Q96D70 268 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CLPTM1LQ96KA5 538 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 DMRTB1Q96MA1 342 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 KCTD14Q9BQ13 255 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 MMP28Q9H239 520 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 MMADHCQ9H3L0 296 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 TXNIPQ9H3M7 391 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 FN3KRPQ9HA64 309 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 TRIM36Q9NQ86 728 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 TMEM100Q9NV29 134 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 NDE1Q9NXR1 346 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CTSZQ9UBR2 303 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 SIGLEC9Q9Y336 463 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 BIRC6Q9NR09 4857 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 IGHV3-64DA0A0J9YX35 117 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 ELOVL7A1L3X0 281 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 TRAPPC13A5PLN9 417 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CPSF4LA6NMK7 179 aaKnown RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 FAM220BPB1ANY3 271 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 KPNA4O00629 521 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 GSTA4O15217 222 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 GYG2O15488 501 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 MLNRO43193 412 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 ADAM20O43506 726 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 SGCEO43556 437 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 LYPD3O95274 346 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 PAHP00439 452 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 OPN1SWP03999 348 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 THY1P04216 161 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 TSPAN19P0C672 248 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 FPR3P25089 353 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 AQP2P41181 271 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 HTR5AP47898 357 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 RGS6P49758 472 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 ENDOGQ14249 297 aaKnown RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 VMACQ2NL98 169 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 C1orf94Q6P1W5 598 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 VMO1Q7Z5L0 202 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 MICU2Q8IYU8 434 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 CLDN22Q8N7P3 220 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 OR4C13Q8NGP0 309 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 PPP1R35Q8TAP8 253 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 THTPAQ9BU02 230 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 TMEM38AQ9H6F2 299 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 RANBP3Q9H6Z4 567 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 MEPEQ9NQ76 525 aaPredicted RBP9.5□□□□□ -0.89
RNF4-216ENST00000511859 ABCD2Q9UBJ2 740 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 SLC7A7Q9UM01 511 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 ANGPT4Q9Y264 503 aa9.5□□□□□ -0.89
RNF4-216ENST00000511859 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
RNF4-216ENST00000511859 IQCF6A8MYZ5 107 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 M0R3H8 397 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 LGALS8O00214 317 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 DOK2O60496 412 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 IGF2P01344 180 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 MT-ND1P03886 318 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 MAB21L1Q13394 359 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 DUSP7Q16829 419 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 LRRC23Q53EV4 343 aaPredicted RBP9.49□□□□□ -0.89
RNF4-216ENST00000511859 CLEC12AQ5QGZ9 265 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 NDUFA11Q86Y39 141 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 C19orf18Q8NEA5 215 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 LIPHQ8WWY8 451 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 B9D2Q9BPU9 175 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 BTBD10Q9BSF8 475 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 FAM234AQ9H0X4 552 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 RAB18Q9NP72 206 aa9.49□□□□□ -0.89
RNF4-216ENST00000511859 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms