RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PDP1Q9P0J1 537 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-207ENST00000511409 TBC1D24Q9ULP9 559 aa1.98□□□□□ -2.09
TRAPPC11-207ENST00000511409 TSSC4Q9Y5U2 329 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC11-207ENST00000511409 PLA2R1Q13018 1463 aa1.98□□□□□ -2.09
TRAPPC11-207ENST00000511409 IGLV2-18A0A075B6J9 118 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 KCNE1BA0A087WTH5 132 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TRAV40A0A0B4J280 105 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 IGHV1-69DA0A0B4J2H0 117 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TSPAN11A1L157 253 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 C5orf63A6NC05 138 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 COLCA2A8K830 154 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 GABRR3A8MPY1 467 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SERPINE3A8MV23 424 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SUPT3HB4E1H0 165 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 GABRPO00591 440 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 NME4O00746 187 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 PLPP1O14494 284 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CHST10O43529 356 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 ZNF207O43670 478 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CACNG3O60359 315 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 AQP8O94778 261 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 RCBTB2O95199 551 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 MPZL1O95297 269 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 HPRT1P00492 218 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 HLA-HP01893 362 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 IFNW1P05000 195 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 IL4P05112 153 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 KRT16P08779 473 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 POLR2MP0CAP2 368 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 UBCP0CG48 685 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CTRB1P17538 263 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TCP1P17987 556 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TNFSF9P41273 254 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CXCL12P48061 93 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TAS2R31P59538 309 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 RPL23P62829 140 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CRADDP78560 199 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 GBE1Q04446 702 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 STUMQ69YW2 141 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SLC25A34Q6PIV7 304 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CLEC2AQ6UVW9 174 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 ANGPTL8Q6UXH0 198 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SLC16A13Q7RTY0 426 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 HORMAD1Q86X24 394 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CBLN2Q8IUK8 224 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 ZNF547Q8IVP9 402 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CDKL3Q8IVW4 592 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 KATNAL2Q8IYT4 538 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TMEM256Q8N2U0 113 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 ARRDC1Q8N5I2 433 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 PQLC3Q8N755 202 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 C11orf72Q8NBR9 251 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 OR52E5Q8NH55 327 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 LINC01560Q8TB33 94 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 JSRP1Q96MG2 331 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 RNF145Q96MT1 663 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 DOK1Q99704 481 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 TBL1YQ9BQ87 522 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SLIRPQ9GZT3 109 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 FGF23Q9GZV9 251 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 IQCGQ9H095 443 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 CLN6Q9NWW5 311 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 MYEF2Q9P2K5 600 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 GGA2Q9UJY4 613 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 RCL1Q9Y2P8 373 aaKnown RBP1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 SAR1BQ9Y6B6 198 aa1.97□□□□□ -2.09
TRAPPC11-207ENST00000511409 IGKV1-8A0A0C4DH67 115 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 A0A0J9YXV3 536 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 A6NDN8 102 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 LRRIQ4A6NIV6 560 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 GOLGA8TH3BQL2 631 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RRP8O43159 456 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RBBP9O75884 186 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 HLA-DQB1P01920 261 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 IL1RNP18510 177 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RAB4AP20338 218 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 USF1P22415 310 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF121P58317 390 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RPS15AP62244 130 aaKnown RBP1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 CACNG7P62955 275 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 CDC20Q12834 499 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 ITIH4Q14624 930 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 NCF4Q15080 339 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 LY6EQ16553 131 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 BEX5Q5H9J7 111 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 NEGR1Q7Z3B1 354 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 VKORC1L1Q8N0U8 176 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 COMMD1Q8N668 190 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 NECAP1Q8NC96 275 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR56A4Q8NGH8 313 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR9A2Q8NGT5 310 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR6N1Q8NGY5 312 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR52P1PQ8NH57 321 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 CA5BP1Q8WTZ4 195 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 ESR2Q92731 530 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 HAUS1Q96CS2 278 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RNF5Q99942 180 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 UQCC2Q9BRT2 126 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 RSG1Q9BU20 258 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 CALN1Q9BXU9 219 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms