RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 NEK6Q9HC98 313 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 ABI3Q9P2A4 366 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 AKAP13Q12802 2813 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 CSRP2Q16527 193 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 ZNF239Q16600 458 aaKnown RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 DVL3Q92997 716 aaPredicted RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 TMEM54Q969K7 222 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 LOC100289279A0A1B0GTE1 492 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 LOC102725191A0A1B0GVB3 256 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 ZNF716A6NP11 495 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 GFRA1P56159 465 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 AIMP2Q13155 320 aaKnown RBP13.11□□□□□ -0.31
PHF3-209ENST00000509330 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 RAB40AQ8WXH6 277 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 OR10A4Q9H209 315 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 CACNA1GO43497 2377 aa13.11□□□□□ -0.31
PHF3-209ENST00000509330 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 GABARAPH6UMI1 98 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ISG15P05161 165 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 PMP22Q01453 160 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ZFP69Q49AA0 526 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.1□□□□□ -0.31
PHF3-209ENST00000509330 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ADGRG7Q96K78 797 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 CALHM2Q9HA72 323 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 HRASLSQ9HDD0 168 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
PHF3-209ENST00000509330 LIPGQ9Y5X9 500 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ETV7Q9Y603 341 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 GLSO94925 669 aaPredicted RBP13.1□□□□□ -0.31
PHF3-209ENST00000509330 MEOX1P50221 254 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ZNF84P51523 738 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 CEACAM16Q2WEN9 425 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 PCGF3Q3KNV8 242 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 EGFL6Q8IUX8 553 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 OR4D10Q8NGI6 311 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 OR2AE1Q8NHA4 323 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 SVILO95425 2214 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 KMT2EQ8IZD2 1858 aa13.1□□□□□ -0.31
PHF3-209ENST00000509330 ALDOBP05062 364 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 BDKRB2P30411 391 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 CCL11P51671 97 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 PIP4P1Q86T03 277 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 C20orf196Q8IYI0 205 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
PHF3-209ENST00000509330 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 EXO5Q9H790 373 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 DSPP15924 2871 aaKnown RBP13.09□□□□□ -0.31
PHF3-209ENST00000509330 ARG2P78540 354 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 MRPS15P82914 257 aaKnown RBP13.09□□□□□ -0.31
PHF3-209ENST00000509330 TCF15Q12870 199 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 ANKRD16Q6P6B7 361 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 BAIAP2L2Q6UXY1 529 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 OR1M1Q8NGA1 313 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 CREB3L1Q96BA8 519 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 B4GALT7Q9UBV7 327 aa13.09□□□□□ -0.31
PHF3-209ENST00000509330 A0A096LPE4 126 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 A0A1W2PPZ6 126 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 XRCC3O43542 346 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 HCKP08631 526 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 WT1P19544 449 aaPredicted RBP13.08□□□□□ -0.31
PHF3-209ENST00000509330 POU4F3Q15319 338 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 CCDC92Q53HC0 331 aaPredicted RBP13.08□□□□□ -0.31
PHF3-209ENST00000509330 GJC3Q8NFK1 279 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 PRRG4Q9BZD6 226 aa13.08□□□□□ -0.31
PHF3-209ENST00000509330 A0A1W2PP11 408 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 FSTP19883 344 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 PMPCAQ10713 525 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 SNAI3Q3KNW1 292 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 C10orf128Q5T292 105 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 AWAT2Q6E213 333 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 ZNF101Q8IZC7 436 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 OR6M1Q8NGM8 313 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 OR2B2Q9GZK3 357 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 PLSCR3Q9NRY6 295 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 ACOT7O00154 380 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 GSTZ1O43708 216 aaPredicted RBP13.08□□□□□ -0.32
PHF3-209ENST00000509330 FAHP16930 419 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 RAB3AP20336 220 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 VEGFCP49767 419 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms