RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 STMN2Q93045 179 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 CMBLQ96DG6 245 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 SLAMF6Q96DU3 332 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 ZNF799Q96GE5 643 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 SYT3Q9BQG1 590 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 EGLN1Q9GZT9 426 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 SLC22A4Q9H015 551 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 RGCCQ9H4X1 137 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 MED20Q9H944 212 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 MYEF2Q9P2K5 600 aaKnown RBP9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 WARS2Q9UGM6 360 aaKnown RBP9.04□□□□□ -0.96
POLR2J3-213ENST00000508848 DOCK11Q5JSL3 2073 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 F5H5K5 113 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 PHYHO14832 338 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 MPZL2O60487 215 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 LYNP07948 512 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 DBHP09172 617 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 SPARCP09486 303 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 CPT2P23786 658 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 HTR1FP30939 366 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 MPV17P39210 176 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 ALDH3B1P43353 468 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 NR4A2P43354 598 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 CDC42P60953 191 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 APOFQ13790 326 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 SNCBQ16143 134 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 OCLNQ16625 522 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 MEDAGQ5VYS4 303 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 ERI1Q8IV48 349 aaKnown RBP9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 CBR4Q8N4T8 237 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 ZNF525Q8N782 197 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 TCEANCQ8N8B7 351 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 OR6N2Q8NGY6 317 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 OR13G1Q8NGZ3 307 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 SLC7A6Q92536 515 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 HPS1Q92902 700 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 IL19Q9UHD0 177 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
POLR2J3-213ENST00000508848 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 SAC3D1A6NKF1 404 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 H7C1Q1 480 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 EI24O14681 340 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 XRCC2O43543 280 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 LCATP04180 440 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 TNFSF4P23510 183 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 POLR2IP36954 125 aaKnown RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 MMP16P51512 607 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 EIF2B1Q14232 305 aaKnown RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 GK2Q14410 553 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 TAF13Q15543 124 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 KLHL12Q53G59 568 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 TMEM255AQ5JRV8 349 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 LYPD4Q6UWN0 246 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 ZNF679Q8IYX0 411 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 ZCCHC24Q8N2G6 241 aaKnown RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 SPERTQ8NA61 448 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 ERGIC1Q969X5 290 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 EME1Q96AY2 570 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 OTULINQ96BN8 352 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 ZMYND19Q96E35 227 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 C1orf159Q96HA4 380 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 ZNF582Q96NG8 517 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 MYCBPQ99417 103 aaPredicted RBP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 DCLRE1BQ9H816 532 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 CENPMQ9NSP4 180 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
POLR2J3-213ENST00000508848 IGHV4-30-2A0A087WSY4 118 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 A0A0U1RQV5 110 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 TRIM64A6NGJ6 449 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 TRIM64BA6NI03 449 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 SNTNA6NMZ2 147 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 CASQ2O14958 399 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 TIMM8AO60220 97 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 GMDSO60547 372 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 RP2O75695 350 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 IGHV1-46P01743 117 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 HPXP02790 462 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 SBK2P0C263 348 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 NAT2P11245 290 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 PSKH1P11801 424 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 ATP6V1B1P15313 513 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 TNFRSF1AP19438 455 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 EGR3Q06889 387 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 MAD2L1BPQ15013 274 aaPredicted RBP9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 ZNF181Q2M3W8 571 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 OTPQ5XKR4 325 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 PGAP1Q75T13 922 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 KCTD20Q7Z5Y7 419 aa9.01□□□□□ -0.97
POLR2J3-213ENST00000508848 NAA40Q86UY6 237 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms