RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KCNG2Q9UJ96 466 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 GNG8Q9UK08 70 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 DKKL1Q9UK85 242 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 FBXW11Q9UKB1 542 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 PITPNC1Q9UKF7 332 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 OR52A1Q9UKL2 312 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 RCE1Q9Y256 329 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 EXOGQ9Y2C4 368 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 FAM96BQ9Y3D0 163 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 OR10H1Q9Y4A9 318 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 CCL27Q9Y4X3 112 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 MMP24Q9Y5R2 645 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 SLCO1B1Q9Y6L6 691 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 R4GN57 208 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 CEP250Q9BV73 2442 aa4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 MTCL1Q9Y4B5 1905 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 FLNBO75369 2602 aaKnown RBP4.05□□□□□ -1.76
PDLIM5-211ENST00000508531 FAM208BQ5VWN6 2430 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 USP24Q9UPU5 2620 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 A0A1B0GW64 132 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 OR5H14A6NHG9 310 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CBY3A6NI87 242 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC38A8A6NNN8 435 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 GABRR3A8MPY1 467 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 NCF1CA8MVU1 366 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 HEPACAM2A8MVW5 462 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CDRT15L2A8MXV6 281 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ANHXE9PGG2 379 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 F5H423 210 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 MANBAO00462 879 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 PLPP2O43688 288 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 TLX2O43763 284 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 TSPAN3O60637 253 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CTNSO60931 367 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SLC25A12O75746 678 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 DIRAS1O95057 198 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 PRAMEF12O95522 483 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 RLN1P04808 185 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 C8GP07360 202 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CD14P08571 375 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CD3GP09693 182 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 LIMS3P0CW19 117 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 LIMS4P0CW20 117 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 AKAIN1P0CW23 69 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 OR5H8P0DN80 308 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 COX7A2P14406 83 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ADCYAP1P18509 176 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 DRD5P21918 477 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 DGKAP23743 735 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ACKR3P25106 362 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 HTR1FP30939 366 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 GDI1P31150 447 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CCR1P32246 355 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 PPM1AP35813 382 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 PTGER3P43115 390 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 RAD52P43351 418 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 OR3A1P47881 315 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CX3CR1P49238 355 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 PNLIPRP2P54317 469 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 KLF3P57682 345 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 UBE2MP61081 183 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ACTA2P62736 377 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ACTG2P63267 376 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 MC1RQ01726 317 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 GPM6BQ13491 265 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SCARB2Q14108 478 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ABRAXAS2Q15018 415 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 RGNQ15493 299 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SMAD1Q15797 465 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ZBTB6Q15916 424 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SYPL1Q16563 259 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 UGCGQ16739 394 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM241Q24JQ0 296 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 TCTN1Q2MV58 587 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF718Q3SXZ3 478 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CPTPQ5TA50 214 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 LYPLAL1Q5VWZ2 237 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SYPL2Q5VXT5 272 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 LEMD1Q68G75 181 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ADAM5Q6NVV9 412 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SMARCD3Q6STE5 483 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF322Q6U7Q0 402 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 TMEM207Q6UWW9 146 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 APOOLQ6UXV4 268 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 HEPN1Q6WQI6 88 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 FBXW12Q6X9E4 464 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 B3GLCTQ6Y288 498 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 RPS27LQ71UM5 84 aaKnown RBP4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 DPPA4Q7L190 304 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 SSX7Q7RTT5 188 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 NUDT13Q86X67 352 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 NRSN1Q8IZ57 195 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 APCDD1Q8J025 514 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 BPIFB2Q8N4F0 458 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 OR2C3Q8N628 320 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF614Q8N883 585 aa4.04□□□□□ -1.76
PDLIM5-211ENST00000508531 ZNF485Q8NCK3 441 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms