RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 FGD3Q5JSP0 725 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZNF362Q5T0B9 420 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 LEG1Q6P5S2 330 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 SHISA2Q6UWI4 295 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ADCK1Q86TW2 530 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 MOGAT3Q86VF5 341 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 LINC00346Q8IVM7 164 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 PARP8Q8N3A8 854 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 FITM2Q8N6M3 262 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ATG16L2Q8NAA4 619 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 BHLHE23Q8NDY6 225 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 C19orf18Q8NEA5 215 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 GJC3Q8NFK1 279 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR52E2Q8NGJ4 325 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR10S1Q8NGN2 331 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR13G1Q8NGZ3 307 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR52J3Q8NH60 311 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 RAB40AQ8WXH6 277 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 APOBEC3DQ96AK3 386 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 MAP6Q96JE9 813 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 COG8Q96MW5 612 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZNF582Q96NG8 517 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 NMNAT3Q96T66 252 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 DDOQ99489 341 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 COQ7Q99807 217 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 MYLK2Q9H1R3 596 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 PRDM13Q9H4Q3 707 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZNF696Q9H7X3 374 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 SRA1Q9HD15 236 aaKnown RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 MRPL22Q9NWU5 206 aaKnown RBP5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 CYB5R1Q9UHQ9 305 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 RPS6KA6Q9UK32 745 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 LRCH1Q9Y2L9 728 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 AP3M1Q9Y2T2 418 aa5.36□□□□□ -1.55
HMGN1P16-201ENST00000508308 IFNL4K9M1U5 179 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 ARPC3O15145 178 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SURF4O15260 269 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 PTBP3O95758 552 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RPS2P15880 293 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 HIST1H1CP16403 213 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MDKP21741 143 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 OMGP23515 440 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MSX2P35548 267 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MDH1P40925 334 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SRP9P49458 86 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 NUDT2P50583 147 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RELBQ01201 579 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SRSF4Q08170 494 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MPPED2Q15777 294 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 DEFB112Q30KQ8 113 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RFX4Q33E94 735 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 PRAMEF6Q5VXH4 476 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 WDR25Q64LD2 544 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 GLYATQ6IB77 296 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SLC27A4Q6P1M0 643 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SMARCD3Q6STE5 483 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RBMS3Q6XE24 437 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 BRD3OSQ6XYD6 125 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RRM2BQ7LG56 351 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 CYP4Z1Q86W10 505 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MUC20Q8N307 709 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 RNF148Q8N7C7 305 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR4K13Q8NH42 304 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 Q8TCH9 128 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 FAM162AQ96A26 154 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 NEIL1Q96FI4 390 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 ERMAPQ96PL5 475 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 KCTD14Q9BQ13 255 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MRI1Q9BV20 369 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 SSBP3Q9BWW4 388 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 HDHD2Q9H0R4 259 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR52D1Q9H346 318 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 FN3KQ9H479 309 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 UNKLQ9H9P5 680 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 ZMAT3Q9HA38 289 aaKnown RBP5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 EFCAB1Q9HAE3 211 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 CTSZQ9UBR2 303 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 MIOXQ9UGB7 285 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 OR5V1Q9UGF6 321 aa5.35□□□□□ -1.55
HMGN1P16-201ENST00000508308 TRAV40A0A0B4J280 105 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 F5H5K5 113 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CCDC22O60826 627 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 FAM20BO75063 409 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 SFTPBP07988 381 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 MMP9P14780 707 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CA6P23280 308 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CPT2P23786 658 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 FPR3P25089 353 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CRABP1P29762 137 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 OTX1P32242 354 aaPredicted RBP5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CD200P41217 278 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 RPS27P42677 84 aaKnown RBP5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 GSSP48637 474 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 PITPNBP48739 271 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 CENPAP49450 140 aa5.34□□□□□ -1.55
HMGN1P16-201ENST00000508308 RPS6KA3P51812 740 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms