RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 NKIRAS2Q9NYR9 191 aa16.97■□□□□ 0.31
SNX25-204ENST00000506896 WARS2Q9UGM6 360 aaKnown RBP16.97■□□□□ 0.31
SNX25-204ENST00000506896 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
SNX25-204ENST00000506896 PURGQ9UJV8 347 aaKnown RBP16.97■□□□□ 0.31
SNX25-204ENST00000506896 FN1P02751 2386 aaKnown RBP16.97■□□□□ 0.31
SNX25-204ENST00000506896 TIMM8AO60220 97 aaPredicted RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 OPRL1P41146 370 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 MMP15P51511 669 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 ALKBH6Q3KRA9 238 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 Q71RC1 249 aaPredicted RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 SPATC1Q76KD6 591 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 BCDIN3DQ7Z5W3 292 aaKnown RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 ZNF525Q8N782 197 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 PACRGLQ8N7B6 248 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 THEM6Q8WUY1 208 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 FAM168AQ92567 244 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 DIRC2Q96SL1 478 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 MBOAT4Q96T53 435 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 POFUT1Q9H488 388 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 DCLRE1BQ9H816 532 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 SMPD3Q9NY59 655 aaPredicted RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 PTTG3PQ9NZH4 202 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 ZDHHC8Q9ULC8 765 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 GMPPBQ9Y5P6 360 aa16.96■□□□□ 0.31
SNX25-204ENST00000506896 YLPM1P49750 1951 aaKnown RBP16.96■□□□□ 0.31
SNX25-204ENST00000506896 CHD3Q12873 2000 aaKnown RBP16.96■□□□□ 0.3
SNX25-204ENST00000506896 ANK3Q12955 4377 aaKnown RBP16.95■□□□□ 0.3
SNX25-204ENST00000506896 NDUFS8O00217 210 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 H2BFMP0C1H6 154 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 DAOP14920 347 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 SELEP16581 610 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 ALOX5APP20292 161 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 HTR1FP30939 366 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 PDLIM4P50479 330 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 ZNF81P51508 661 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 SNRPGP62308 76 aaKnown RBP16.95■□□□□ 0.3
SNX25-204ENST00000506896 POU4F2Q12837 409 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 SLC25A30Q5SVS4 291 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
SNX25-204ENST00000506896 ZNF283Q8N7M2 679 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 ASB17Q8WXJ9 295 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 POM121Q96HA1 1249 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 REG4Q9BYZ8 158 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 NIPAL2Q9H841 368 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 ABCA1O95477 2261 aa16.95■□□□□ 0.3
SNX25-204ENST00000506896 LOC390937A0A1W2PQ73 354 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 RNF223E7ERA6 249 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 PHYHO14832 338 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 MPZL2O60487 215 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 LY6HO94772 140 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 MRPL3P09001 348 aaKnown RBP16.94■□□□□ 0.3
SNX25-204ENST00000506896 SLC25A16P16260 332 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 CX3CR1P49238 355 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 PRKXP51817 358 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 ELF3P78545 371 aaPredicted RBP16.94■□□□□ 0.3
SNX25-204ENST00000506896 MRPS11P82912 194 aaKnown RBP16.94■□□□□ 0.3
SNX25-204ENST00000506896 HLXQ14774 488 aaPredicted RBP16.94■□□□□ 0.3
SNX25-204ENST00000506896 TMEM255AQ5JRV8 349 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 FAM209AQ5JX71 171 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 MEDAGQ5VYS4 303 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 DEGS2Q6QHC5 323 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 NAA40Q86UY6 237 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 UBASH3BQ8TF42 649 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 ZNF582Q96NG8 517 aaPredicted RBP16.94■□□□□ 0.3
SNX25-204ENST00000506896 AMELYQ99218 206 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 OPA3Q9H6K4 179 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 ADGRL4Q9HBW9 690 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNX25-204ENST00000506896 HIVEP2P31629 2446 aa16.94■□□□□ 0.3
SNX25-204ENST00000506896 LOC100130705A0A1B0GUX0 176 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 SNTNA6NMZ2 147 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 SLC16A6O15403 523 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 ADH4P08319 380 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 ZNF786Q8N393 782 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 ZNF540Q8NDQ6 660 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 ZNF555Q8NEP9 628 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 OR52H1Q8NGJ2 320 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 C10orf105Q8TEF2 133 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 FAM118AQ9NWS6 357 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 CLN6Q9NWW5 311 aa16.93■□□□□ 0.3
SNX25-204ENST00000506896 IQCF6A8MYZ5 107 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 CASQ2O14958 399 aaPredicted RBP16.92■□□□□ 0.3
SNX25-204ENST00000506896 XRCC2O43543 280 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 ZNF254O75437 659 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 ANXA2P07355 339 aaKnown RBP16.92■□□□□ 0.3
SNX25-204ENST00000506896 SBK2P0C263 348 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 PEX2P28328 305 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 ROM1Q03395 351 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 KRTAP1-1Q07627 177 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 GK2Q14410 553 aaPredicted RBP16.92■□□□□ 0.3
SNX25-204ENST00000506896 OCLNQ16625 522 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 LRRC36Q1X8D7 754 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 SNAI3Q3KNW1 292 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 PGAP1Q75T13 922 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 MRPL21Q7Z2W9 205 aaKnown RBP16.92■□□□□ 0.3
SNX25-204ENST00000506896 KRT77Q7Z794 578 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 SLC35F2Q8IXU6 374 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 GALNT4Q8N4A0 578 aa16.92■□□□□ 0.3
SNX25-204ENST00000506896 RDH5Q92781 318 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms