RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TCEANCQ8N8B7 351 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 ZNF582Q96NG8 517 aaPredicted RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 CNN2Q99439 309 aaKnown RBP14.22□□□□□ -0.13
SNCA-209ENST00000506244 BPESC1Q9GZL8 116 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 YIPF3Q9GZM5 350 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 LAMP5Q9UJQ1 280 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 TMEM14AQ9Y6G1 99 aa14.22□□□□□ -0.13
SNCA-209ENST00000506244 CHD3Q12873 2000 aaKnown RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 CD55P08174 381 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 H2BFMP0C1H6 154 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 EPHA2P29317 976 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 RIN1Q13671 783 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 GGTLC2Q14390 218 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 HLXQ14774 488 aaPredicted RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 ZSCAN26Q16670 478 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 TSTQ16762 297 aaKnown RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 TMEM255AQ5JRV8 349 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 PGAP1Q75T13 922 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 MRPL21Q7Z2W9 205 aaKnown RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 CBR4Q8N4T8 237 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 MAPK1IP1LQ8NDC0 245 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 GTF3AQ92664 365 aaKnown RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 TEAD3Q99594 435 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 SMR3AQ99954 134 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 GSX1Q9H4S2 264 aaPredicted RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 NIPAL2Q9H841 368 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 MSL2Q9HCI7 577 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 IMPAD1Q9NX62 359 aa14.21□□□□□ -0.13
SNCA-209ENST00000506244 NOP16Q9Y3C1 178 aaKnown RBP14.21□□□□□ -0.13
SNCA-209ENST00000506244 IGHV1-69-2A0A0G2JMI3 117 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 CCDC182A6NF36 153 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 IQCF6A8MYZ5 107 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 XRCC2O43543 280 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 LY6G6DO95868 133 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 TNFRSF1AP19438 455 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 OPRL1P41146 370 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 CRYBB2P43320 205 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 GPR6P46095 362 aaPredicted RBP14.2□□□□□ -0.14
SNCA-209ENST00000506244 CX3CR1P49238 355 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 PRKXP51817 358 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 CHN2P52757 468 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 TMEM33P57088 247 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 TNFAIP6P98066 277 aaPredicted RBP14.2□□□□□ -0.14
SNCA-209ENST00000506244 CDK5R2Q13319 367 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 GK2Q14410 553 aaPredicted RBP14.2□□□□□ -0.14
SNCA-209ENST00000506244 HFEQ30201 348 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 OR2T2Q6IF00 324 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 KCTD18Q6PI47 426 aaPredicted RBP14.2□□□□□ -0.14
SNCA-209ENST00000506244 USP51Q70EK9 711 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 SPATC1Q76KD6 591 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 MEPCEQ7L2J0 689 aaKnown RBP14.2□□□□□ -0.14
SNCA-209ENST00000506244 OR8G5Q8NG78 346 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 OR52H1Q8NGJ2 320 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 OR8J1Q8NGP2 316 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 THEM6Q8WUY1 208 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 EME1Q96AY2 570 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 IL4I1Q96RQ9 567 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 MNTQ99583 582 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 CR1P17927 2039 aa14.2□□□□□ -0.14
SNCA-209ENST00000506244 M0R129 80 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 PHYHO14832 338 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 ANXA2P07355 339 aaKnown RBP14.19□□□□□ -0.14
SNCA-209ENST00000506244 CFL1P23528 166 aaKnown RBP14.19□□□□□ -0.14
SNCA-209ENST00000506244 SLC3A1Q07837 685 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 POU4F2Q12837 409 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 TMEM249Q2WGJ8 235 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 SNAI3Q3KNW1 292 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 AADACL4Q5VUY2 407 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 OR5AS1Q8N127 324 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 OR2Z1Q8NG97 314 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 OR13G1Q8NGZ3 307 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 FAM81AQ8TBF8 368 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 SPRYD4Q8WW59 207 aaPredicted RBP14.19□□□□□ -0.14
SNCA-209ENST00000506244 ASB17Q8WXJ9 295 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 RFKQ969G6 155 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 TIMD4Q96H15 378 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 SLC22A4Q9H015 551 aa14.19□□□□□ -0.14
SNCA-209ENST00000506244 ZNF275Q9NSD4 429 aaPredicted RBP14.19□□□□□ -0.14
SNCA-209ENST00000506244 CLDN25C9JDP6 229 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 LYNX1G3V0Z9 82 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 CD5LO43866 347 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 RP2O75695 350 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 BAG2O95816 211 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 MRPL3P09001 348 aaKnown RBP14.18□□□□□ -0.14
SNCA-209ENST00000506244 TACSTD2P09758 323 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 LYNX1P0DP58 116 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 ALOX5APP20292 161 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 GZMKP49863 264 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 EFNB1P98172 346 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 ZBTB49Q6ZSB9 765 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 KRT77Q7Z794 578 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 NAA40Q86UY6 237 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 BHLHE23Q8NDY6 225 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 TRUB1Q8WWH5 349 aaKnown RBP14.18□□□□□ -0.14
SNCA-209ENST00000506244 YIPF5Q969M3 257 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 HRASLS5Q96KN8 279 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 OR10A2Q9H208 303 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 HAO2Q9NYQ3 351 aa14.18□□□□□ -0.14
SNCA-209ENST00000506244 WARS2Q9UGM6 360 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms