RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 CLEC12AQ5QGZ9 265 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 REC114Q7Z4M0 266 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 C11orf44Q8N8P7 122 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 PNLDC1Q8NA58 520 aaKnown RBP7.58□□□□□ -1.2
PTPN20-216ENST00000506080 PCYOX1LQ8NBM8 494 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 OR10A6Q8NH74 314 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 OR1F12Q8NHA8 337 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 RASD2Q96D21 266 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 BPIFA2Q96DR5 249 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 CGREF1Q99674 301 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 RERGLQ9H628 205 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN20-216ENST00000506080 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN20-216ENST00000506080 FAM96BQ9Y3D0 163 aa7.58□□□□□ -1.2
PTPN20-216ENST00000506080 V9GYY5 206 aaPredicted RBP7.58□□□□□ -1.2
PTPN20-216ENST00000506080 BTBD17A6NE02 478 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 LGALS8O00214 317 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 RER1O15258 196 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 PLXNB1O43157 2135 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 TSPAN9O75954 239 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 CTLA4P16410 223 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 LOXL3P58215 753 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 PRB3Q04118 309 aaPredicted RBP7.57□□□□□ -1.2
PTPN20-216ENST00000506080 COX10Q12887 443 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 OR8B8Q15620 311 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
PTPN20-216ENST00000506080 Q6ZTK2 550 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 BTN2A1Q7KYR7 527 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 Q8TCH9 128 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 RASSF5Q8WWW0 418 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 APOBEC3DQ96AK3 386 aaPredicted RBP7.57□□□□□ -1.2
PTPN20-216ENST00000506080 ECSITQ9BQ95 431 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 TOR3AQ9H497 397 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 KAT8Q9H7Z6 458 aaKnown RBP7.57□□□□□ -1.2
PTPN20-216ENST00000506080 NKIRAS1Q9NYS0 192 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 ZNRD1Q9P1U0 126 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 VPREB3Q9UKI3 123 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 SIGLEC9Q9Y336 463 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
PTPN20-216ENST00000506080 TEX13CA0A0J9YWL9 993 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 A0A1W2PRD5 423 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 A0A1W2PRF3 423 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 A0A1W2PRM7 423 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 ANKRD61A6NGH8 418 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 IMPA2O14732 288 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 OR10H3O60404 316 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FCN3O75636 299 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 GYPAP02724 150 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FUT4P22083 530 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 RPL4P36578 427 aaKnown RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 CD200P41217 278 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 RAD23AP54725 363 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FHL1Q13642 323 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 HERPUD1Q15011 391 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 VMACQ2NL98 169 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 MESTQ5EB52 335 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 BEND6Q5SZJ8 279 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 SLC35E4Q6ICL7 350 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 CCDC80Q76M96 950 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 OAFQ86UD1 273 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FGFRL1Q8N441 504 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 OR13C2Q8NGS9 318 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 LRRC8CQ8TDW0 803 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 SGCDQ92629 289 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 Q96M85 177 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 CCDC28BQ9BUN5 200 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 HCAR1Q9BXC0 346 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 POLR2J2Q9GZM3 115 aaKnown RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 POLR2J3Q9H1A7 115 aaKnown RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 PPA2Q9H2U2 334 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 RNF7Q9UBF6 113 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 GRHPRQ9UBQ7 328 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 DNAJB11Q9UBS4 358 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 FOXJ3Q9UPW0 622 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 COA3Q9Y2R0 106 aaPredicted RBP7.56□□□□□ -1.2
PTPN20-216ENST00000506080 POLR1DQ9Y2S0 133 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
PTPN20-216ENST00000506080 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 A0A1B0GWJ7 208 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 EFCAB9A8MZ26 197 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 XKRYO14609 159 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 PAX4O43316 350 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 SLC16A7O60669 478 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 FBP1P09467 338 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 GABRA5P31644 462 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 TGFBR2P37173 567 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 YAP1P46937 504 aaKnown RBP7.55□□□□□ -1.2
PTPN20-216ENST00000506080 SLC9A3P48764 834 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 GZMMP51124 257 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 SLC18A1P54219 525 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 DLX1P56177 255 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 LSM6P62312 80 aaKnown RBP7.55□□□□□ -1.2
PTPN20-216ENST00000506080 NFYCQ13952 458 aa7.55□□□□□ -1.2
PTPN20-216ENST00000506080 OR8G1Q15617 311 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms