RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 KCNG2Q9UJ96 466 aa17.56■□□□□ 0.4
SQSTM1-210ENST00000506042 TRAV38-1A0A0B4J264 116 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 BTBD17A6NE02 478 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 UNC119BA6NIH7 251 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 IMPA2O14732 288 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 GMDSO60547 372 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 TOX4O94842 621 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 SERPINA1P01009 418 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 LCATP04180 440 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 DBHP09172 617 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 RHCEP18577 417 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 OMGP23515 440 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 SLC6A6P31641 620 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 IFNGR2P38484 337 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 CD200P41217 278 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 COX10Q12887 443 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 FHL1Q13642 323 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 TBPL2Q6SJ96 375 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 BRD3OSQ6XYD6 125 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 DYRK2Q92630 601 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 RCN3Q96D15 328 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 MMP27Q9H306 513 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 EFCAB1Q9HAE3 211 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 SAMD4AQ9UPU9 718 aaKnown RBP17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 SNX13Q9Y5W8 968 aa17.55■□□□□ 0.4
SQSTM1-210ENST00000506042 DOCK11Q5JSL3 2073 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 A0A0G2JK05 382 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 CLPSL1A2RUU4 121 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 ZNF879B4DU55 563 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 F5H5K5 113 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 FFAR1O14842 300 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 MLNRO43193 412 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 TXNDC12O95881 172 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 ECDO95905 644 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 GGT2P36268 569 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 ERFP50548 548 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 OR8B8Q15620 311 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 Q6YL49 198 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 SCCPDHQ8NBX0 429 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 SLC7A13Q8TCU3 470 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 WFDC12Q8WWY7 111 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 ERMAPQ96PL5 475 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 KCTD14Q9BQ13 255 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 DPAGT1Q9H3H5 408 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 OPA3Q9H6K4 179 aa17.54■□□□□ 0.4
SQSTM1-210ENST00000506042 H0YL77 283 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 CCDC22O60826 627 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 ZNF823P16415 610 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 MDH1P40925 334 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 HIST1H3AP68431 136 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 HIST2H3PS2Q5TEC6 136 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 HIST2H3AQ71DI3 136 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 FANK1Q8TC84 345 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 TNFRSF19Q9NS68 423 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 ACOXLQ9NUZ1 547 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 C14orf119Q9NWQ9 140 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 LHFPL6Q9Y693 200 aa17.53■□□□□ 0.4
SQSTM1-210ENST00000506042 MEGF8Q7Z7M0 2845 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 A0A1B0GWJ7 208 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 GGT3PA6NGU5 568 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 LGALS8O00214 317 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 IDH3BO43837 385 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 FAM20BO75063 409 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 PTP4A3O75365 173 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 GRK5P34947 590 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 PSMB10P40306 273 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 GK2Q14410 553 aaPredicted RBP17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 GDPGP1Q6ZNW5 385 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 COLCA1Q6ZS62 124 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 KIR3DL3Q8N743 410 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 ADAT1Q9BUB4 502 aaKnown RBP17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 NSRP1Q9H0G5 558 aaKnown RBP17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 WDR76Q9H967 626 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 MARCH7Q9H992 704 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 SRA1Q9HD15 236 aaKnown RBP17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 FGFR1OP2Q9NVK5 253 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 CMTM6Q9NX76 183 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 FAM96BQ9Y3D0 163 aa17.52■□□□□ 0.4
SQSTM1-210ENST00000506042 IGHV3-64DA0A0J9YX35 117 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 TNFRSF13BO14836 293 aaPredicted RBP17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 ADAM20O43506 726 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 HLA-DPB1P04440 258 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 ACSM4P0C7M7 580 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 CFHR2P36980 270 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 SLC7A2P52569 658 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 TRAP1Q12931 704 aaKnown RBP17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 SLC15A3Q8IY34 581 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 CMTM4Q8IZR5 234 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 SLCO4A1Q96BD0 722 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 UFSP2Q9NUQ7 469 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 B9D1Q9UPM9 204 aa17.51■□□□□ 0.39
SQSTM1-210ENST00000506042 MDFIC2A0A1B0GVS7 189 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 A6NLC8 198 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 M0R135 149 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 ARPC3O15145 178 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 CDKN2AP42771 156 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 CORO6Q6QEF8 472 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 PTCHD4Q6ZW05 846 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 BOLLQ8N9W6 283 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms