RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ACTR3CQ9C0K3 210 aaPredicted RBP2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 C1orf198Q9H425 327 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM27Q9HBJ8 222 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 ENOPH1Q9UHY7 261 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 SCN4AP35499 1836 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 FHOD3Q2V2M9 1422 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 SYCE1LA8MT33 242 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 KRBOX1C9JBD0 128 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 NDUFC2-KCTD14E9PQ53 114 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 CDH16O75309 829 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 LSM8O95777 96 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 IGLV3-25P01717 112 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 KRT14P02533 472 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 IL1RNP18510 177 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 ME2P23368 584 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 MRPL19P49406 292 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 GFERP55789 205 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 RPS15P62841 145 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 CCNA1P78396 465 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 BEX3Q00994 111 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 CYP24A1Q07973 514 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 NCF4Q15080 339 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 RBMY1FQ15415 496 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 HSDL1Q3SXM5 330 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 TPTE2P1Q5T6R2 138 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 UNQ9165/PRO28630Q6UXU0 137 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 CENPQQ7L2Z9 268 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 SCD5Q86SK9 330 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 LUZP2Q86TE4 346 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 BBS5Q8N3I7 341 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 CSGALNACT2Q8N6G5 542 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 TTLQ8NG68 377 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 OR9G4Q8NGQ1 327 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 OR6Q1Q8NGQ2 317 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 PHF10Q8WUB8 498 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 C17orf50Q8WW18 174 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 RTN4IP1Q8WWV3 396 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 NRBF2Q96F24 287 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 ZNF717Q9BY31 904 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 SAMD10Q9BYL1 202 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM38AQ9H6F2 299 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 EXOSC4Q9NPD3 245 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 MED4Q9NPJ6 270 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 GCNT4Q9P109 453 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 SLC17A7Q9P2U7 560 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 SIGLEC9Q9Y336 463 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 UBN2Q6ZU65 1347 aa2.1□□□□□ -2.07
TOPBP1-204ENST00000505804 TRIM64CA6NLI5 447 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 TEX46H3BTG2 121 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 LGALS9O00182 355 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 SYKP43405 635 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 ART3Q13508 389 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 SPANXN2Q5MJ10 180 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM220Q6QAJ8 160 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 METAP1DQ6UB28 335 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 LRRC52Q8N7C0 313 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 TTC29Q8NA56 475 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 NRGNQ92686 78 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 MCUR1Q96AQ8 359 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 C8orf44Q96CB5 159 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 GSDMAQ96QA5 445 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 XPO6Q96QU8 1125 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 RSG1Q9BU20 258 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 ZYG11BQ9C0D3 744 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 SLIRPQ9GZT3 109 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 GEMIN7Q9H840 131 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 MRM3Q9HC36 420 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 MYOZ1Q9NP98 299 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 ACP6Q9NPH0 428 aa2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 LYARQ9NX58 379 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-204ENST00000505804 PCDH11XQ9BZA7 1347 aa2.09□□□□□ -2.08
TOPBP1-204ENST00000505804 TICRRQ7Z2Z1 1910 aa2.09□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV1-69DA0A0B4J2H0 117 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 CENPVL3A0A0U1RRI6 287 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 H7C0C1 242 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 DNALI1O14645 258 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 NMT2O60551 498 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 GLSO94925 669 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 RNASE2P10153 161 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 POLR2IP36954 125 aaKnown RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 ATP5OP48047 213 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF121P58317 390 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 TAS2R46P59540 309 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 MERTKQ12866 999 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 SPESP1Q6UW49 350 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 GABRG1Q8N1C3 465 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 MYCBPQ99417 103 aaPredicted RBP2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 UCK2Q9BZX2 261 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 SLC39A1Q9NY26 324 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 CBY1Q9Y3M2 126 aa2.08□□□□□ -2.08
TOPBP1-204ENST00000505804 A0A075B6Q4 140 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 TRAV6A0A075B6T7 132 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV7-4-1A0A0J9YVY3 117 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 OR5H1A6NKK0 313 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 POLR1CO15160 346 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 EIF1BO60739 113 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 HBE1P02100 147 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 ERCC1P07992 297 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 CLTAP09496 248 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms