RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SUDS3Q9H7L9 328 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 GORASP2Q9H8Y8 452 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 NHEJ1Q9H9Q4 299 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 FOLH1BQ9HBA9 442 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TM9SF3Q9HD45 589 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 GPATCH2LQ9NWQ4 482 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 SMPD3Q9NY59 655 aaPredicted RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 BFARQ9NZS9 450 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 TMCO1Q9UM00 188 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 CLEC4AQ9UMR7 237 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 RPL36Q9Y3U8 105 aaKnown RBP2.17□□□□□ -2.06
RFC1-209ENST00000504974 AKAP6Q13023 2319 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 ZGRF1Q86YA3 2104 aa2.17□□□□□ -2.06
RFC1-209ENST00000504974 STAB1Q9NY15 2570 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 A0A1B0GTQ1 180 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 A0A1W2PNU3 283 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 A0A1W2PQ67 120 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TCRBV9S1A1TA0A576 114 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 GJE1A6NN92 205 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PRAMEF26H0Y7S4 382 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 DFFAO00273 331 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PSTPIP1O43586 416 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TRAF3IP2O43734 574 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 MFSD11O43934 449 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 NPIPB7O75200 414 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PALMO75781 387 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TNFSF13O75888 250 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PROSCO94903 275 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CD160O95971 181 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 INSP01308 110 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 KRT7P08729 469 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 ABOP16442 354 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ZNF17P17021 662 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CCNCP24863 283 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PRDX3P30048 256 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 PTGDSP41222 190 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 SLC1A1P43005 524 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CSNK1DP48730 415 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ARRB1P49407 418 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 CSNK1EP49674 416 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 HNMTP50135 292 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 EFNB2P52799 333 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 HADHBP55084 474 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 AP1S1P61966 158 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RPS21P63220 83 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 DAZ2Q13117 558 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 DNAJC3Q13217 504 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ZNF235Q14590 738 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PDK2Q15119 407 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PDK3Q15120 406 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 NRF1Q16656 503 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 KLF17Q5JT82 389 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 C1orf100Q5SVJ3 147 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OR2G6Q5TZ20 316 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 NCBP2-AS2Q69YL0 99 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OR4F3Q6IEY1 312 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 KDM7AQ6ZMT4 941 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TIFABQ6ZNK6 161 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RGS9BPQ6ZS82 235 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 HORMAD1Q86X24 394 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RDH10Q8IZV5 341 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 SUMF2Q8NBJ7 301 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 MFSD9Q8NBP5 474 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OR52H1Q8NGJ2 320 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OR51S1Q8NGJ8 323 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OR52M1Q8NGK5 317 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CXorf40AQ8TE69 158 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 RNF138Q8WVD3 245 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ARPC1AQ92747 370 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 EMG1Q92979 244 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 ECHDC3Q96DC8 303 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CXorf40BQ96DE9 158 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ZNF414Q96IQ9 312 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CYYR1Q96J86 154 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 ZNF641Q96N77 438 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 SLC38A2Q96QD8 506 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PSKH2Q96QS6 385 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 PANX2Q96RD6 677 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 KCNA7Q96RP8 456 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CHP1Q99653 195 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 CALN1Q9BXU9 219 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 SELENOIQ9C0D9 397 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 DAZ3Q9NR90 486 aaKnown RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 SMOXQ9NWM0 555 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 C6orf203Q9P0P8 240 aaPredicted RBP2.16□□□□□ -2.06
RFC1-209ENST00000504974 TMCC3Q9ULS5 477 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 POLDIP2Q9Y2S7 368 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 FADS3Q9Y5Q0 445 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 SLCO1B1Q9Y6L6 691 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TACC2O95359 2948 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 OTOGQ6ZRI0 2925 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 SCN8AQ9UQD0 1980 aa2.16□□□□□ -2.06
RFC1-209ENST00000504974 TLN2Q9Y4G6 2542 aa2.15□□□□□ -2.07
RFC1-209ENST00000504974 SONP18583 2426 aaKnown RBP2.15□□□□□ -2.07
RFC1-209ENST00000504974 PSMB11A5LHX3 300 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms