RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 DEDD2Q8WXF8 326 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 MAFIPQ8WZ33 124 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 C4orf45Q96LM5 186 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PPA2Q9H2U2 334 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF71Q9NQZ8 489 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PTPRDP23468 1912 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 EPHA1P21709 976 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 MAGEA5P43359 124 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 OXA1LQ15070 435 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 CDK10Q15131 360 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PPA1Q15181 289 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PLEKHN1Q494U1 663 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 C12orf45Q8N5I9 185 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF416Q9BWM5 594 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 KLK11Q9UBX7 282 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 PLEKHB1Q9UF11 243 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 NLRC5Q86WI3 1866 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SLC34A2O95436 690 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 GAAP10253 952 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 FGF9P31371 208 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 SNRPNP63162 240 aaKnown RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 RBMS2Q15434 407 aaKnown RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 FCN2Q15485 313 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ELFN2Q5R3F8 820 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF574Q6ZN55 896 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 TMEM105Q8N8V8 129 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 WDR54Q9H977 334 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
TCOF1-207ENST00000504761 MAB21L2Q9Y586 359 aa12.6□□□□□ -0.39
TCOF1-207ENST00000504761 ANGPTL7O43827 346 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 HPP00738 406 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 HLA-HP01893 362 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 SPINK2P20155 84 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 EIF5AP63241 154 aaKnown RBP12.59□□□□□ -0.39
TCOF1-207ENST00000504761 ARF1P84077 181 aaKnown RBP12.59□□□□□ -0.39
TCOF1-207ENST00000504761 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 MESP1Q9BRJ9 268 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
TCOF1-207ENST00000504761 OR5H15A6NDH6 313 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 MCRIP1C9JLW8 97 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 F5H5P2 479 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 NXPH2O95156 264 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 CCL2P13500 99 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 RBP2P50120 134 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 FABP6P51161 128 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 GNMTQ14749 295 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 LINC00299Q6ZSB3 139 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 RRNAD1Q96FB5 475 aaKnown RBP12.59□□□□□ -0.39
TCOF1-207ENST00000504761 REEP6Q96HR9 211 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 SPSB2Q99619 263 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 PSD2Q9BQI7 771 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 GPR87Q9BY21 358 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 DYNLRB1Q9NP97 96 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 PRRG2O14669 202 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 TSPAN2O60636 221 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 NGFRP08138 427 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
TCOF1-207ENST00000504761 OR51F2Q8NH61 342 aa12.59□□□□□ -0.39
TCOF1-207ENST00000504761 PRAF2O60831 178 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 SELENOPP49908 381 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 CCR9P51686 369 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF774Q6NX45 483 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 OR2M3Q8NG83 312 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 ADIPOR1Q96A54 375 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 NICN1Q9BSH3 213 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 C12orf10Q9HB07 376 aa12.58□□□□□ -0.39
TCOF1-207ENST00000504761 PTP4A3O75365 173 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 OPRM1P35372 400 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 NPY4RP50391 375 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 DLX5P56178 289 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 RAB1AP62820 205 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SLC23A3Q6PIS1 610 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 EXD3Q8N9H8 876 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 OR52H1Q8NGJ2 320 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 FLVCR1-AS1Q8TAF5 88 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 EFSO43281 561 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SIX6O95475 246 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 NRASP01111 189 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 FGF5P12034 268 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF32P17041 273 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 ANXA7P20073 488 aaKnown RBP12.58□□□□□ -0.4
TCOF1-207ENST00000504761 DOK1Q99704 481 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SRRQ9GZT4 340 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SLCO5A1Q9H2Y9 848 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 NEUROG3Q9Y4Z2 214 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 H3BMH7 237 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 DCTN6O00399 190 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SOX8P57073 446 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 INSM1Q01101 510 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-207ENST00000504761 EIF5AL1Q6IS14 154 aaKnown RBP12.58□□□□□ -0.4
TCOF1-207ENST00000504761 CMTM1Q8IZ96 169 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 ABHD3Q8WU67 409 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 SECTM1Q8WVN6 248 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms