RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ZNF799Q96GE5 643 aa11.53□□□□□ -0.56
HOXC6-203ENST00000504315 GAL3ST1Q99999 423 aa11.53□□□□□ -0.56
HOXC6-203ENST00000504315 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
HOXC6-203ENST00000504315 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 PPIAL4CA0A0B4J2A2 164 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 TVP23AA6NH52 213 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 FSTL3O95633 263 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 IFNGP01579 166 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 GYPBP06028 91 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 CLUP10909 449 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF3P17036 446 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 GRK5P34947 590 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 GATA4P43694 442 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 BTG1P62324 171 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 HNRNPA0Q13151 305 aaKnown RBP11.52□□□□□ -0.57
HOXC6-203ENST00000504315 FLOT2Q14254 428 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF181Q2M3W8 571 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 KRTAP24-1Q3LI83 254 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 DRAM2Q6UX65 266 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
HOXC6-203ENST00000504315 DCXRQ7Z4W1 244 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 LRRC28Q86X40 367 aaPredicted RBP11.52□□□□□ -0.57
HOXC6-203ENST00000504315 CELF2-AS1Q8N7Q2 184 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF511Q8NB15 262 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 PAPD5Q8NDF8 572 aaKnown RBP11.52□□□□□ -0.57
HOXC6-203ENST00000504315 OR10AD1Q8NGE0 317 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 ST7LQ8TDW4 575 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 HCAR1Q9BXC0 346 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 MARCH7Q9H992 704 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 POMPQ9Y244 141 aa11.52□□□□□ -0.57
HOXC6-203ENST00000504315 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.57
HOXC6-203ENST00000504315 A0A0G2JMP0 313 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 A0A0X1KG70 313 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 ISPDA4D126 451 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 RIIAD1A6NNX1 92 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 A8MXK9 166 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 F5H0A9 414 aaPredicted RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 J3QLI3 93 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 DNAJC8O75937 253 aaPredicted RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 AVPP01185 164 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 LCATP04180 440 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 ANOS1P23352 680 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 GATA3P23771 443 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 RBMXP38159 391 aaKnown RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 SRP9P49458 86 aaKnown RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 MALLQ13021 153 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 SNAI3Q3KNW1 292 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 SPICQ8N5J4 248 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 TEX29Q8N6K0 151 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 ATG16L2Q8NAA4 619 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 OR4M2Q8NGB6 313 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 SPTSSAQ969W0 71 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 TMPRSS13Q9BYE2 586 aa11.51□□□□□ -0.57
HOXC6-203ENST00000504315 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 PDP1Q9P0J1 537 aaPredicted RBP11.51□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF878C9JN71 531 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 H0YL77 283 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 H3BN98 237 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF593O00488 134 aaPredicted RBP11.5□□□□□ -0.57
HOXC6-203ENST00000504315 FKBP6O75344 327 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 FOXH1O75593 365 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 SPARCP09486 303 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 CPT2P23786 658 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 CD200P41217 278 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 ZNF92Q03936 586 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 MAB21L1Q13394 359 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 ZMYND11Q15326 602 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 PGAP1Q75T13 922 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 RHOUQ7L0Q8 258 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 HS3ST5Q8IZT8 346 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 MUC20Q8N307 709 aaPredicted RBP11.5□□□□□ -0.57
HOXC6-203ENST00000504315 IQCF1Q8N6M8 205 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 BHLHE23Q8NDY6 225 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 OR6K6Q8NGW6 343 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 KCNJ15Q99712 375 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 COPS4Q9BT78 406 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 YY1AP1Q9H869 796 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 TMEM100Q9NV29 134 aa11.5□□□□□ -0.57
HOXC6-203ENST00000504315 A0A0A6YYJ9 748 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 C5orf63A6NC05 138 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 F5H5P2 479 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 GNGT2O14610 69 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 GSC2O15499 205 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 TCF21O43680 179 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 GLCEO94923 617 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
HOXC6-203ENST00000504315 SBK2P0C263 348 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 OSMP13725 252 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 ANXA8P13928 327 aa11.49□□□□□ -0.57
HOXC6-203ENST00000504315 ZFP36P26651 326 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms