RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 BAIAP2Q9UQB8 552 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 POLR3KQ9Y2Y1 108 aaPredicted RBP10.06□□□□□ -0.8
MED28-203ENST00000503945 AUP1Q9Y679 476 aa10.06□□□□□ -0.8
MED28-203ENST00000503945 F5H5P2 479 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 ZNF593O00488 134 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 BHLHE40O14503 412 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 HLA-DPB1P04440 258 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 WNT2P09544 360 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 CALB2P22676 271 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 PYCR1P32322 319 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 BLVRAP53004 296 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 RAD23AP54725 363 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 DBPQ10586 325 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 ZNF154Q13106 437 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 KRTAP27-1Q3LI81 207 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 ESCO2Q56NI9 601 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 OR2T5Q6IEZ7 315 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 ZNF770Q6IQ21 691 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 MOGAT3Q86VF5 341 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 LNX2Q8N448 690 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 AQP11Q8NBQ7 271 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OR10AD1Q8NGE0 317 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OR9Q2Q8NGE9 314 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OR51L1Q8NGJ5 315 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OR2T29Q8NH02 315 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 ZNF420Q8TAQ5 688 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 GCDHQ92947 438 aaPredicted RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 ERGIC1Q969X5 290 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 PLEKHA8Q96JA3 519 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 MAP6Q96JE9 813 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 SIGLEC11Q96RL6 698 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 MRI1Q9BV20 369 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 SLC22A4Q9H015 551 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 NTN4Q9HB63 628 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 CENPMQ9NSP4 180 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 MIOXQ9UGB7 285 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 OPN4Q9UHM6 478 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 SAMHD1Q9Y3Z3 626 aaKnown RBP10.05□□□□□ -0.8
MED28-203ENST00000503945 U3KQV3 271 aa10.05□□□□□ -0.8
MED28-203ENST00000503945 IGHV3-64DA0A0J9YX35 117 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 TVP23AA6NH52 213 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 TRAPPC2LH3BP13 241 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 M0R135 149 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 ZNF205O95201 554 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 FSTL3O95633 263 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 FAM107AO95990 144 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 CYB5R3P00387 301 aaPredicted RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 IFNGP01579 166 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 RBMXP38159 391 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 MAGEA2P43356 314 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 SLC15A1P46059 708 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 MMP16P51512 607 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 HILS1P60008 231 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 MS4A2Q01362 244 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 PPP1R8Q12972 351 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 HNRNPA0Q13151 305 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 ZNF181Q2M3W8 571 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 DRAM2Q6UX65 266 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 CELF2-AS1Q8N7Q2 184 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 SLC37A3Q8NCC5 494 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 OR2T33Q8NG76 320 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 OR11L1Q8NGX0 322 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 ZNF799Q96GE5 643 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 DDX28Q9NUL7 540 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 TBC1D23Q9NUY8 699 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 OR5V1Q9UGF6 321 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 PRPF19Q9UMS4 504 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 NOP16Q9Y3C1 178 aaKnown RBP10.04□□□□□ -0.8
MED28-203ENST00000503945 PPIAL4AQ9Y536 164 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 N6AMT1Q9Y5N5 214 aa10.04□□□□□ -0.8
MED28-203ENST00000503945 ARHGAP32A7KAX9 2087 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 TCRBV5S2A0A599 114 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 TMEM89A2RUT3 159 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 GGT3PA6NGU5 568 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 CD300LBA8K4G0 201 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 CEACAM18A8MTB9 384 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 GNGT2O14610 69 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 MLNRO43193 412 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 GMDSO60547 372 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 SPARCP09486 303 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 RAP2AP10114 183 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 ATP6V1B2P21281 511 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 GATA4P43694 442 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 COMPP49747 757 aaPredicted RBP10.03□□□□□ -0.8
MED28-203ENST00000503945 SLC25A1P53007 311 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 ACTG1P63261 375 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 OR8G1Q15617 311 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 TEX30Q5JUR7 227 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 LCN8Q6JVE9 175 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 BTNL3Q6UXE8 466 aa10.03□□□□□ -0.8
MED28-203ENST00000503945 LRRN1Q6UXK5 716 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms