RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SSX3Q99909 188 aa12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 NPFFR1Q9GZQ6 430 aa12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 KAAG1Q9UBP8 84 aa12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 DNAJB11Q9UBS4 358 aa12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 NOP16Q9Y3C1 178 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 MED31Q9Y3C7 131 aa12.93□□□□□ -0.34
PDLIM7-210ENST00000503827 TRBV5-3A0A0A0MS03 114 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 WI2-2373I1.2A0A1W2PRP0 233 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 TAS2R41P59536 307 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 STX1BP61266 288 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 PRB3Q04118 309 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 ACSM1Q08AH1 577 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 KLRD1Q13241 179 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 OR8G1Q15617 311 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 PAGE3Q5JUK9 113 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 LY6G5BQ8NDX9 201 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 OR52B2Q96RD2 323 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
PDLIM7-210ENST00000503827 H7C1C5 153 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 MSX2P35548 267 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 PRSS12P56730 875 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 LSM6P62312 80 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 LCN6P62502 163 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 CYP51A1Q16850 503 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 PATL1Q86TB9 770 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 FAM90A1Q86YD7 464 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 PNKDQ8N490 385 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 PLPP7Q8NBV4 271 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 OR51G2Q8NGK0 314 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 SLC7A13Q8TCU3 470 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 RASSF5Q8WWW0 418 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 SPDL1Q96EA4 605 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 SLC22A4Q9H015 551 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 RIMS3Q9UJD0 308 aa12.91□□□□□ -0.34
PDLIM7-210ENST00000503827 DNAH9Q9NYC9 4486 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 E9PQ18 207 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 RER1O15258 196 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 UBE2E1P51965 193 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 DLX1P56177 255 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 POU4F2Q12837 409 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 GK2Q14410 553 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 BLOC1S3Q6QNY0 202 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 FGFRL1Q8N441 504 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 COQ7Q99807 217 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 C1orf123Q9NWV4 160 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
PDLIM7-210ENST00000503827 TEX13CA0A0J9YWL9 993 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 C3orf84H3BNL1 204 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 AHCYL1O43865 530 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 OR5F1O95221 314 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 PTBP3O95758 552 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 FAHP16930 419 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 CA6P23280 308 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 MALLQ13021 153 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 LRRC75BQ2VPJ9 315 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 OTPQ5XKR4 325 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 NCR3LG1Q68D85 454 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 FUNDC1Q8IVP5 155 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 GCSAMQ8N6F7 178 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 Q8N7P7 452 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 TAMM41Q96BW9 452 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 BPIFA2Q96DR5 249 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 NKX3-1Q99801 234 aaPredicted RBP12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 CCDC167Q9P0B6 97 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 POLR1DQ9Y2S0 133 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 SH3GLB1Q9Y371 365 aa12.89□□□□□ -0.35
PDLIM7-210ENST00000503827 IGHV3OR15-7A0A075B7D8 119 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 A6NLC8 198 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 XKRYO14609 159 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 RGS16O15492 202 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 GMDSO60547 372 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 SNNO75324 88 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 IFI30P13284 250 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 SLC35A2P78381 396 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 MPP2Q14168 576 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 DOC2BQ14184 412 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 TEX36Q5VZQ5 186 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
PDLIM7-210ENST00000503827 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms