RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-215	ENST00000498528	PCYOX1L	Q8NBM8	494 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	C11orf65	Q8NCR3	313 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	OR51A7	Q8NH64	312 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	OR1F12	Q8NHA8	337 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	FNDC8	Q8TC99	324 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	TMEM239	Q8WW34	195 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	CCL13	Q99616	98 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	SSX3	Q99909	188 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	CITED2	Q99967	270 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	DCTN5	Q9BTE1	182 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	ADAT1	Q9BUB4	502 aa	Known RBP	4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	TMEM38A	Q9H6F2	299 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	EVA1A	Q9H8M9	152 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	CCDC167	Q9P0B6	97 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	VAPA	Q9P0L0	249 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	DUX4	Q9UBX2	424 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	HAO1	Q9UJM8	370 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	CORO2B	Q9UQ03	480 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	SH3GLB1	Q9Y371	365 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	MED31	Q9Y3C7	131 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	KPTN	Q9Y664	436 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	DNAH9	Q9NYC9	4486 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	TENM2	Q9NT68	2774 aa		4.93	□□□□□ -1.62
KDM3A-215	ENST00000498528	TRAV27	A0A087WT01	109 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	OR6C6	A6NF89	314 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528		A6NIZ1	184 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528		F5H5K5	113 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	XKRY	O14609	159 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RER1	O15258	196 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	FSTL3	O95633	263 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	PPP1R3D	O95685	299 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	ECD	O95905	644 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	PF4	P02776	101 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	IFI30	P13284	250 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	HOXB9	P17482	250 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	POU1F1	P28069	291 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	HOXD3	P31249	432 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	SLC9A3	P48764	834 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RGS6	P49758	472 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	MTPN	P58546	118 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RAP1B	P61224	184 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RAP1A	P62834	184 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	MALL	Q13021	153 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	AQP6	Q13520	282 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	PIN1	Q13526	163 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	CCDC92	Q53HC0	331 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	PAGE3	Q5JUK9	113 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	FOXL2NB	Q6ZUU3	175 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	PGAP1	Q75T13	922 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	MRPL21	Q7Z2W9	205 aa	Known RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	NDUFA11	Q86Y39	141 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	FAM90A1	Q86YD7	464 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	FAM216B	Q8N7L0	139 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	NPRL2	Q8WTW4	380 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	SLCO4A1	Q96BD0	722 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	TAMM41	Q96BW9	452 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	SPDL1	Q96EA4	605 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	OCSTAMP	Q9BR26	566 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	ZNF426	Q9BUY5	554 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	NPFFR1	Q9GZQ6	430 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	FAM234A	Q9H0X4	552 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	TRIM36	Q9NQ86	728 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	GRHPR	Q9UBQ7	328 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RIMS3	Q9UJD0	308 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	RPS6KA6	Q9UK32	745 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	AURKC	Q9UQB9	309 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	COA3	Q9Y2R0	106 aa	Predicted RBP	4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	CAPN7	Q9Y6W3	813 aa		4.92	□□□□□ -1.62
KDM3A-215	ENST00000498528	TRBV23-1	A0A0A0MS06	115 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528		A0A1W2PQ09	198 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	GGT3P	A6NGU5	568 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	NPIPB13	A6NJU9	1138 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	NPIPB4	C9JG80	1138 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528		E9PQ18	207 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	NDUFB3	O43676	98 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	NDUFA2	O43678	99 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	ANGPTL7	O43827	346 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	SLC16A7	O60669	478 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	FCN3	O75636	299 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	LCAT	P04180	440 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	ZNF26	P17031	533 aa	Predicted RBP	4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	GPX2	P18283	190 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	GGT2	P36268	569 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	CD200	P41217	278 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	RBM34	P42696	430 aa	Known RBP	4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	GATA4	P43694	442 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	OR1E2	P47887	323 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	BMX	P51813	675 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	KRTAP10-11	P60412	298 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	MPP2	Q14168	576 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	GK2	Q14410	553 aa	Predicted RBP	4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	MEP1B	Q16820	701 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	LRRC75B	Q2VPJ9	315 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	AGK	Q53H12	422 aa		4.91	□□□□□ -1.62
KDM3A-215	ENST00000498528	DMRTC1	Q5HYR2	192 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms