RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SPRY3O43610 288 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 TIMM8AO60220 97 aaPredicted RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 GLCEO94923 617 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 FAM157CP0CG43 387 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 ZNF823P16415 610 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 MMP15P51511 669 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 BLVRAP53004 296 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 AQP4P55087 323 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 FAM209AQ5JX71 171 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 SLC35D3Q5M8T2 416 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 GID4Q8IVV7 300 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 DHRSXQ8N5I4 330 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 LINC01356Q8N9X3 169 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 GJC3Q8NFK1 279 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 OR8J1Q8NGP2 316 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 OR6N2Q8NGY6 317 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 ZNRF4Q8WWF5 429 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 GTF3AQ92664 365 aaKnown RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 ADI1Q9BV57 179 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 H2AFY2Q9P0M6 372 aaPredicted RBP13.06□□□□□ -0.32
NUP50-219ENST00000497960 ATPIF1Q9UII2 106 aa13.06□□□□□ -0.32
NUP50-219ENST00000497960 ATRQ13535 2644 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 IGHV1-69-2A0A0G2JMI3 117 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 OR6C6A6NF89 314 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 RP2O75695 350 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 TFP02787 698 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 HNF1AP20823 631 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 SLC2A5P22732 501 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 IL2RGP31785 369 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 CRYBB2P43320 205 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 RGS6P49758 472 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 NXNL2Q5VZ03 156 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 TTC23Q5W5X9 447 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 USP51Q70EK9 711 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
NUP50-219ENST00000497960 ERI1Q8IV48 349 aaKnown RBP13.05□□□□□ -0.32
NUP50-219ENST00000497960 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 PTP4A1Q93096 173 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 ZMYND19Q96E35 227 aaPredicted RBP13.05□□□□□ -0.32
NUP50-219ENST00000497960 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 INTS14Q96SY0 518 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 APOL4Q9BPW4 351 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 SOX7Q9BT81 388 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 CDADC1Q9BWV3 514 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 EGLN1Q9GZT9 426 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 HDHD2Q9H0R4 259 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 MRPL22Q9NWU5 206 aaKnown RBP13.05□□□□□ -0.32
NUP50-219ENST00000497960 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 KCNG2Q9UJ96 466 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 ZDHHC8Q9ULC8 765 aa13.05□□□□□ -0.32
NUP50-219ENST00000497960 CCDC182A6NF36 153 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 E9PQ18 207 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 J3QW42 95 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 SLC16A6O15403 523 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 SPARCP09486 303 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 GSTT1P30711 240 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 CAPGP40121 348 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 ENTPD1P49961 510 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 CDH15P55291 814 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 IL5RAQ01344 420 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 PSG7Q13046 419 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 HFEQ30201 348 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 LINC01590Q5TEZ4 76 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 IZUMO2Q6UXV1 221 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 SETD9Q8NE22 299 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 OR5L1Q8NGL2 311 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 OR2AJ1Q8NGZ0 328 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 CLDND2Q8NHS1 167 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 SLC7A6Q92536 515 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 COQ7Q99807 217 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
NUP50-219ENST00000497960 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 LHFPL6Q9Y693 200 aa13.04□□□□□ -0.32
NUP50-219ENST00000497960 B4DSR2 109 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 MPZL2O60487 215 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 SELENOFO60613 162 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 CLIC3O95833 236 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 ADH4P08319 380 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 MRPL3P09001 348 aaKnown RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 DBHP09172 617 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 VHLP40337 213 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 RPS27P42677 84 aaKnown RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 HIST1H3AP68431 136 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 HIST2H3PS2Q5TEC6 136 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms