RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ZNF799Q96GE5 643 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 COPS4Q9BT78 406 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 SP140LQ9H930 580 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 CENPMQ9NSP4 180 aa9.78□□□□□ -0.84
HLA-B-254ENST00000497377 H2AFY2Q9P0M6 372 aaPredicted RBP9.78□□□□□ -0.84
HLA-B-254ENST00000497377 PURGQ9UJV8 347 aaKnown RBP9.78□□□□□ -0.84
HLA-B-254ENST00000497377 ZNF469Q96JG9 3925 aaPredicted RBP9.78□□□□□ -0.84
HLA-B-254ENST00000497377 SLC22A31A6NKX4 558 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 EI24O14681 340 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 SMAD7O15105 426 aaKnown RBP9.77□□□□□ -0.85
HLA-B-254ENST00000497377 TLX2O43763 284 aaPredicted RBP9.77□□□□□ -0.85
HLA-B-254ENST00000497377 PRKYO43930 277 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 LCATP04180 440 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 PSKH1P11801 424 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ACHEP22303 614 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 USF1P22415 310 aaPredicted RBP9.77□□□□□ -0.85
HLA-B-254ENST00000497377 TNFSF4P23510 183 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 EPHA2P29317 976 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 NR4A2P43354 598 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 SLC6A9P48067 706 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ALDH3A2P51648 485 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 CARTPTQ16568 116 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ALKBH6Q3KRA9 238 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 CLEC9AQ6UXN8 241 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 SLC16A9Q7RTY1 509 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 GID4Q8IVV7 300 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 TCEANCQ8N8B7 351 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 RNF133Q8WVZ7 376 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 TEAD3Q99594 435 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ABHD6Q9BV23 337 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 YIPF3Q9GZM5 350 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 EGLN1Q9GZT9 426 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 RIBC2Q9H4K1 309 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 OPA3Q9H6K4 179 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 CHODLQ9H9P2 273 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 DECR2Q9NUI1 292 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 PTTG3PQ9NZH4 202 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 CR1P17927 2039 aa9.77□□□□□ -0.85
HLA-B-254ENST00000497377 ZANQ9Y493 2812 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 MTORP42345 2549 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 A0A096LNT2 108 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CCDC182A6NF36 153 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 IQCF6A8MYZ5 107 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 TPD52L2O43399 206 aaKnown RBP9.76□□□□□ -0.85
HLA-B-254ENST00000497377 SELENOFO60613 162 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 IGHV1-46P01743 117 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 HPXP02790 462 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 LYNP07948 512 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CD55P08174 381 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 HSD11B1P28845 292 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 MAGEB1P43366 347 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CDC42P60953 191 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CCL8P80075 99 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CDK5R2Q13319 367 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 GGTLC2Q14390 218 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 TMEM255AQ5JRV8 349 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 AADACL4Q5VUY2 407 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 MEPCEQ7L2J0 689 aaKnown RBP9.76□□□□□ -0.85
HLA-B-254ENST00000497377 CBR4Q8N4T8 237 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 BBS1Q8NFJ9 593 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 OR8J1Q8NGP2 316 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 THEM6Q8WUY1 208 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 TRUB1Q8WWH5 349 aaKnown RBP9.76□□□□□ -0.85
HLA-B-254ENST00000497377 MNTQ99583 582 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 POFUT1Q9H488 388 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 NIPAL2Q9H841 368 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 SAP30LQ9HAJ7 183 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 HAO2Q9NYQ3 351 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 LAMP5Q9UJQ1 280 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 TMEM14AQ9Y6G1 99 aa9.76□□□□□ -0.85
HLA-B-254ENST00000497377 IGHV1-69-2A0A0G2JMI3 117 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 ZSCAN5BA6NJL1 495 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 XRCC2O43543 280 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 SPRY3O43610 288 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 NCR1O76036 304 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 HEXAP06865 529 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 H2BFMP0C1H6 154 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 ALOX5APP20292 161 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 POLR2IP36954 125 aaKnown RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 OPRL1P41146 370 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 NAA10P41227 235 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 CRYBB2P43320 205 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 PRKXP51817 358 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 TMEM33P57088 247 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 TMED1Q13445 227 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 RIN1Q13671 783 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 HLXQ14774 488 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 KCTD18Q6PI47 426 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 DEGS2Q6QHC5 323 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 ZBTB49Q6ZSB9 765 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 PGAP1Q75T13 922 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 MRPL21Q7Z2W9 205 aaKnown RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 NAA40Q86UY6 237 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.75□□□□□ -0.85
HLA-B-254ENST00000497377 ZNF283Q8N7M2 679 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 OR8G5Q8NG78 346 aa9.75□□□□□ -0.85
HLA-B-254ENST00000497377 OR52H1Q8NGJ2 320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms