RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 IGLV1-44P01699 117 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 LIPFP07098 398 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 GUSBP08236 651 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 KRT16P08779 473 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 LINC00032P0C843 101 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ATP6V1C1P21283 382 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 MDH1P40925 334 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 P2RY4P51582 365 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 GTF2A1P52655 376 aaPredicted RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 ELLP55199 621 aaPredicted RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 NAA20P61599 178 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ACTG1P63261 375 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 CX3CL1P78423 397 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SRSF4Q08170 494 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 LGALS3BPQ08380 585 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 MERTKQ12866 999 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 GGTLC2Q14390 218 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SLC17A1Q14916 467 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 RBMS2Q15434 407 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 TSPO2Q5TGU0 170 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SLC25A24Q6NUK1 477 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 CASP12Q6UXS9 341 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 TMPPEQ6ZT21 453 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 GRINAQ7Z429 371 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 HMGN2P46Q86SG4 172 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 C10orf107Q8IVU9 208 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 RNF113BQ8IZP6 322 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 FBXL14Q8N1E6 418 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 CLEC4FQ8N1N0 589 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ZNF614Q8N883 585 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ZNF114Q8NC26 417 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ATP6V1C2Q8NEY4 427 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 PIGXQ8TBF5 258 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 MIPOL1Q8TD10 442 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 OR5P2Q8WZ92 322 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 TMEM45BQ96B21 275 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 DNAJA3Q96EY1 480 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 THOC1Q96FV9 657 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 ALKBH3Q96Q83 286 aaPredicted RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 ASCL2Q99929 193 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 C1orf50Q9BV19 199 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 TIGARQ9NQ88 270 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 EXOSC3Q9NQT5 275 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 CTPS2Q9NRF8 586 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SLC7A10Q9NS82 523 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 ACER3Q9NUN7 267 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 EMC3Q9P0I2 261 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 KCNS2Q9ULS6 477 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 MGAT4BQ9UQ53 548 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 SLC9A8Q9Y2E8 581 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 NOSIPQ9Y314 301 aaKnown RBP3.59□□□□□ -1.83
VPS52-222ENST00000495981 FIS1Q9Y3D6 152 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 FRAS1Q86XX4 4008 aa3.59□□□□□ -1.83
VPS52-222ENST00000495981 COL7A1Q02388 2944 aa3.59□□□□□ -1.84
VPS52-222ENST00000495981 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ARPC4-TTLL3A0A0A6YYG9 625 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 RPS10-NUDT3A0A1W2PQS6 291 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 LRP5LA4QPB2 252 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 C9JVG2 144 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 F8WDY8 70 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 H3BNH8 94 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SULT2B1O00204 365 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 FAAHO00519 579 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 NOL3O60936 208 aaKnown RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 AK1P00568 194 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CSTAP01040 98 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 IGKV3-15P01624 115 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 H1F0P07305 194 aaKnown RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 TACSTD2P09758 323 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 NUDT17P0C025 328 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CECR9P0C854 216 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CPA3P15088 417 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ZNF23P17027 643 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 GIFP27352 417 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ALDH3A1P30838 453 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CALCRP30988 508 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CCT3P49368 545 aaKnown RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 PPOXP50336 477 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 FABP6P51161 128 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SSBP2P81877 361 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 GALK2Q01415 458 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SQLEQ14534 574 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 TRIP10Q15642 601 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ZSCAN26Q16670 478 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ARHGAP11BQ3KRB8 267 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CCDC153Q494R4 210 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 HIKESHIQ53FT3 197 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CFAP157Q5JU67 520 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 C9orf135Q5VTT2 229 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SAXO2Q658L1 398 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 TNFAIP8L2Q6P589 184 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 PAQR6Q6TCH4 344 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CCBE1Q6UXH8 406 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 ZCCHC23Q6ZST2 131 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 GPR141Q7Z602 305 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ZNF100Q8IYN0 542 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 C4orf33Q8N1A6 199 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms