RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 APOC1P02654 83 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 FOSL1P15407 271 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 ALOX5APP20292 161 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 HTR1FP30939 366 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 CX3CR1P49238 355 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 ELF3P78545 371 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 LRRC36Q1X8D7 754 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 CIARTQ8N365 385 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 C10orf105Q8TEF2 133 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 UBASH3BQ8TF42 649 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 RFKQ969G6 155 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 ZNF582Q96NG8 517 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 RDH12Q96NR8 316 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 C8orf4Q9NR00 106 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 SMPD3Q9NY59 655 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 HAO2Q9NYQ3 351 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 NKIRAS2Q9NYR9 191 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 DNAJC27Q9NZQ0 273 aa13.85□□□□□ -0.19
YIF1A-209ENST00000494836 WARS2Q9UGM6 360 aaKnown RBP13.85□□□□□ -0.19
YIF1A-209ENST00000494836 LOC390937A0A1W2PQ73 354 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 NDUFS8O00217 210 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SMAD7O15105 426 aaKnown RBP13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SPRY3O43610 288 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 NCR1O76036 304 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 HPXP02790 462 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 ANXA2P07355 339 aaKnown RBP13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SLC2A1P11166 492 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SLC25A16P16260 332 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 PEX2P28328 305 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 MAGEB1P43366 347 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 HCCSP53701 268 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 CCL8P80075 99 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 GK2Q14410 553 aaPredicted RBP13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 FAM209AQ5JX71 171 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 LPCAT4Q643R3 524 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 OR2T2Q6IF00 324 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 KCTD18Q6PI47 426 aaPredicted RBP13.84□□□□□ -0.19
YIF1A-209ENST00000494836 LRRN1Q6UXK5 716 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 PGAP1Q75T13 922 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 MRPL21Q7Z2W9 205 aaKnown RBP13.84□□□□□ -0.19
YIF1A-209ENST00000494836 ZNF786Q8N393 782 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 GALNT4Q8N4A0 578 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 OR51G2Q8NGK0 314 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 PIMREGQ9BSJ6 248 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 SP140LQ9H930 580 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 ADGRL4Q9HBW9 690 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 MSL2Q9HCI7 577 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 ZDHHC8Q9ULC8 765 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 N6AMT1Q9Y5N5 214 aa13.84□□□□□ -0.19
YIF1A-209ENST00000494836 LOC100130705A0A1B0GUX0 176 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
YIF1A-209ENST00000494836 IGHV1-46P01743 117 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 INHBBP09529 407 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 SBK2P0C263 348 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 SELEP16581 610 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.2
YIF1A-209ENST00000494836 POU4F2Q12837 409 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 TMED1Q13445 227 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 TSTQ16762 297 aaKnown RBP13.83□□□□□ -0.2
YIF1A-209ENST00000494836 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 SLC35F2Q8IXU6 374 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 OR5AS1Q8N127 324 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 PACRGLQ8N7B6 248 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 ASB17Q8WXJ9 295 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 UBE2FQ969M7 185 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 DIRC2Q96SL1 478 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 MNTQ99583 582 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 NIPAL2Q9H841 368 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 SAP30LQ9HAJ7 183 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 DECR2Q9NUI1 292 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 FAM118AQ9NWS6 357 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 CLN6Q9NWW5 311 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.83□□□□□ -0.2
YIF1A-209ENST00000494836 COPS3Q9UNS2 423 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 CHD3Q12873 2000 aaKnown RBP13.83□□□□□ -0.2
YIF1A-209ENST00000494836 MTORP42345 2549 aa13.83□□□□□ -0.2
YIF1A-209ENST00000494836 PHYHO14832 338 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 TBX1O43435 398 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 XRCC2O43543 280 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ADH4P08319 380 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ANOS1P23352 680 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ATP6V1E1P36543 226 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 PRSS12P56730 875 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ZNF121P58317 390 aaPredicted RBP13.82□□□□□ -0.2
YIF1A-209ENST00000494836 PSMA6P60900 246 aaKnown RBP13.82□□□□□ -0.2
YIF1A-209ENST00000494836 MRPS11P82912 194 aaKnown RBP13.82□□□□□ -0.2
YIF1A-209ENST00000494836 SLC25A30Q5SVS4 291 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 GLYATL3Q5SZD4 288 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 MEDAGQ5VYS4 303 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 DEGS2Q6QHC5 323 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 USP51Q70EK9 711 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 FAM57BQ71RH2 274 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 BHLHE23Q8NDY6 225 aa13.82□□□□□ -0.2
YIF1A-209ENST00000494836 ZNF555Q8NEP9 628 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms