RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 Q6ZN92 141 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 GGNQ86UU5 652 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 FAM71AQ8IYT1 594 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 PNKDQ8N490 385 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 PXT1Q8NFP0 134 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 OR10G7Q8NGN6 311 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 C16orf52Q8NHV5 167 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 FRAT1Q92837 279 aaPredicted RBP5.54□□□□□ -1.52
SNX13-210ENST00000494402 RAB8BQ92930 207 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 C11orf52Q96A22 123 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 ANKRD9Q96BM1 317 aaPredicted RBP5.54□□□□□ -1.52
SNX13-210ENST00000494402 COL21A1Q96P44 957 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 RASL11BQ9BPW5 248 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 NIPSNAP1Q9BPW8 284 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 TM2D1Q9BX74 207 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 UGT2B28Q9BY64 529 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 IL25Q9H293 177 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
SNX13-210ENST00000494402 ABCC13Q9NSE7 274 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 TMEM181Q9P2C4 612 aa5.54□□□□□ -1.52
SNX13-210ENST00000494402 IGHV3-20A0A0C4DH32 117 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 M0R1B8 84 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 GABRPO00591 440 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 NUPL2O15504 423 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 C1QL1O75973 258 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 PTTG1O95997 202 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 TYMSP04818 313 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 SNRPAP09012 282 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 DAOP14920 347 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 ZNF12P17014 697 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 GPX4P36969 197 aaPredicted RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 KIR2DS4P43632 304 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR12D2P58182 307 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 PPP1CBP62140 327 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 RBMS2Q15434 407 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 NRF1Q16656 503 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 C3orf33Q6P1S2 294 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 PTF1AQ7RTS3 328 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 YTHDF3Q7Z739 585 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 TMED4Q7Z7H5 227 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 DAW1Q8N136 415 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 ZNF491Q8N8L2 437 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR1M1Q8NGA1 313 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR4K17Q8NGC6 315 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR10R2Q8NGX6 335 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR10Z1Q8NGY1 313 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 OR2V1Q8NHB1 315 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 RNF138Q8WVD3 245 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 PIK3IP1Q96FE7 263 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 TEAD3Q99594 435 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 TRABDQ9H4I3 376 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 DDX19AQ9NUU7 478 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 RAB26Q9ULW5 256 aa5.53□□□□□ -1.52
SNX13-210ENST00000494402 FARSAQ9Y285 508 aaKnown RBP5.53□□□□□ -1.52
SNX13-210ENST00000494402 NUP153P49790 1475 aaKnown RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 TINCRA0A1B0GVN0 87 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 EFCAB9A8MZ26 197 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 K7EQD1 137 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 KCNK1O00180 336 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 FADS1O60427 444 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 MELTFP08582 738 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 TCP1P17987 556 aaKnown RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 USF1P22415 310 aaPredicted RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 UBE2E1P51965 193 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 ZNF121P58317 390 aaPredicted RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 FCHO2Q0JRZ9 810 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 TEAD2Q15562 447 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 ATP6AP1Q15904 470 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 CHRFAM7AQ494W8 412 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 TMEM179Q6ZVK1 233 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 S100A7AQ86SG5 101 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 SLC51BQ86UW2 128 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 MYPOPQ86VE0 399 aaPredicted RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 C10orf107Q8IVU9 208 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 ARRDC1Q8N5I2 433 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 SPICQ8N5J4 248 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 BEST4Q8NFU0 473 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 OR51E1Q8TCB6 317 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 ZBTB9Q96C00 473 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 FGGYQ96C11 551 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 MED8Q96G25 268 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 UBE2E2Q96LR5 201 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 ZNF354BQ96LW1 612 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 SDHCQ99643 169 aaPredicted RBP5.52□□□□□ -1.53
SNX13-210ENST00000494402 GABRG3Q99928 467 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 SPRR3Q9UBC9 169 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 RARRES3Q9UL19 164 aa5.52□□□□□ -1.53
SNX13-210ENST00000494402 IGHV1OR21-1A0A087WYE8 117 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 OTOL1A6NHN0 477 aaPredicted RBP5.51□□□□□ -1.53
SNX13-210ENST00000494402 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
SNX13-210ENST00000494402 C2orf74A8MZ97 194 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 TNFRSF11BO00300 401 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 IDH3BO43837 385 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 UGT2B11O75310 529 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 ENTPD6O75354 484 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 CTDNEP1O95476 244 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 NUDT3O95989 172 aa5.51□□□□□ -1.53
SNX13-210ENST00000494402 HIST1H1EP10412 219 aaKnown RBP5.51□□□□□ -1.53
SNX13-210ENST00000494402 SELEP16581 610 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms