RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 STEAP1Q9UHE8 339 aa9.44□□□□□ -0.9
PDLIM1-205ENST00000493949 ZNF407Q9C0G0 2248 aa9.44□□□□□ -0.9
PDLIM1-205ENST00000493949 A0A0G2JN53 185 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 A0A0J9YY10 115 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 IDSB3KWA1 339 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 NPIPA5E9PKD4 350 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SELENOFO60613 162 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SCGNO76038 276 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 GKN3PP0CG01 181 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 PNMTP11086 282 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SPI1P17947 270 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 CDK2P24941 298 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SKP1P63208 163 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 BTN3A2P78410 334 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SCRN3Q0VDG4 424 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 ALKBH1Q13686 389 aaKnown RBP9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 LTB4RQ15722 352 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 PABPC1L2AQ5JQF8 200 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 ABHD17BQ5VST6 288 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 TMEM211Q6ICI0 200 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 OR5M10Q6IEU7 315 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 FAHD2BQ6P2I3 314 aaPredicted RBP9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 STAC2Q6ZMT1 411 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 MOB3CQ70IA8 216 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 FCRLAQ7L513 359 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SSX6Q7RTT6 188 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 OLIG3Q7RTU3 272 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 KCNRGQ8N5I3 272 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 TMEM229BQ8NBD8 167 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 MDS2Q8NDY4 140 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 C7orf57Q8NEG2 295 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 OR52E2Q8NGJ4 325 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 OR5AK2Q8NH90 309 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 CTHRC1Q96CG8 243 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 FAHD2AQ96GK7 314 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 SEC22CQ9BRL7 303 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 LRFN1Q9P244 771 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 NPIPA1Q9UND3 350 aa9.43□□□□□ -0.9
PDLIM1-205ENST00000493949 IGLV3-12A0A075B6K2 115 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 TRAV27A0A087WT01 109 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 A0A087WUJ7 227 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 IGHV1-45A0A0A0MS14 117 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 GGT3PA6NGU5 568 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 FAM90A27PA6NNH2 459 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 PIN1P1O15428 100 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ARPC5O15511 151 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 PRKRAO75569 313 aaKnown RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CDC123O75794 336 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 GPR75O95800 540 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 LPLP06858 475 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ZNF888P0CJ79 500 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 C8orf89P0DMQ9 161 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CD37P11049 281 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 TBPP20226 339 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 HOXA1P49639 335 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 FHL1Q13642 323 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 MEF2DQ14814 521 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ZNF660Q6AZW8 331 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 PRSS45Q7RTY3 260 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 VN1R4Q7Z5H5 301 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CDC20BQ86Y33 519 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 SHISA5Q8N114 240 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ARMC10Q8N2F6 343 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 NPEPL1Q8NDH3 523 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 FAM57AQ8TBR7 257 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 STT3BQ8TCJ2 826 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 TNFAIP8L1Q8WVP5 186 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ZNF285Q96NJ3 590 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 GFI1Q99684 422 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 GINS4Q9BRT9 223 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 HES7Q9BYE0 225 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 MFFQ9GZY8 342 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CA10Q9NS85 328 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 CUTCQ9NTM9 273 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 MBD2Q9UBB5 411 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 ATPIF1Q9UII2 106 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 PURGQ9UJV8 347 aaKnown RBP9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 HIF3AQ9Y2N7 669 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 EML6Q6ZMW3 1958 aa9.42□□□□□ -0.9
PDLIM1-205ENST00000493949 LOC102723996A0A087X1L8 192 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 A0A1B0GTI1 187 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 FITM1A5D6W6 292 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 MEGF11A6BM72 1044 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 BLOC1S5-TXNDC5H3BN57 136 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 BCL2L11O43521 198 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 LDB3O75112 727 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 SLC35E2P0CK97 266 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 ICAM2P13598 275 aa9.41□□□□□ -0.9
PDLIM1-205ENST00000493949 HIST1H1CP16403 213 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms