RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 TSC22D1Q15714 1073 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 TBRG1Q3YBR2 411 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 KCTD21Q4G0X4 260 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 HIKESHIQ53FT3 197 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 C1QTNF12Q5T7M4 302 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 OR7E24Q6IFN5 339 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 SLC18B1Q6NT16 456 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 TMEM154Q6P9G4 183 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 DPY19L4Q7Z388 723 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 THEM6Q8WUY1 208 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 MYCBPQ99417 103 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 TTTY10Q9BZA0 68 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 YIPF3Q9GZM5 350 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 RNF121Q9H920 327 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 MARCH7Q9H992 704 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 ERVK-18Q9QC07 812 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 ASH2LQ9UBL3 628 aa10.53□□□□□ -0.72
UPF3A-210ENST00000493727 EXOGQ9Y2C4 368 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 EXOSC1Q9Y3B2 195 aaKnown RBP10.53□□□□□ -0.72
UPF3A-210ENST00000493727 ALPK2Q86TB3 2170 aa10.52□□□□□ -0.72
UPF3A-210ENST00000493727 MYL12BO14950 172 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 UBL3O95164 117 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 PLAUP00749 431 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 MT-ND2P03891 347 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 CDK1P06493 297 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 LYNP07948 512 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 RPSAP08865 295 aaKnown RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 OR2T7P0C7T2 308 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 CD79AP11912 226 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 SLC35A2P78381 396 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 SCRN3Q0VDG4 424 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 AQP6Q13520 282 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 ENDOGQ14249 297 aaKnown RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 TAB1Q15750 504 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 KCNMB1Q16558 191 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 SLC36A2Q495M3 483 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 NCMAPQ5T1S8 102 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 FAM27BQ5VT28 67 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 TMEM53Q6P2H8 277 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 CORO6Q6QEF8 472 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 DCXRQ7Z4W1 244 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 C17orf78Q8N4C9 275 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 ACBD7Q8N6N7 88 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 OR2T27Q8NH04 317 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 C1orf198Q9H425 327 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF696Q9H7X3 374 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 MOV10Q9HCE1 1003 aaKnown RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 FGF20Q9NP95 211 aaPredicted RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 INPP5EQ9NRR6 644 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 PAK1IP1Q9NWT1 392 aaPredicted RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 IKZF2Q9UKS7 526 aa10.52□□□□□ -0.73
UPF3A-210ENST00000493727 DIMT1Q9UNQ2 313 aaKnown RBP10.52□□□□□ -0.73
UPF3A-210ENST00000493727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.732e-8■■■■□ 23.5
UPF3A-210ENST00000493727 A0A1W2PQL4 384 aaPredicted RBP10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 MAGEA13PA6NCF6 341 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 HLA-HP01893 362 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 PAX7P23759 505 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 HCCSP53701 268 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 CDH15P55291 814 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TUBA1BP68363 451 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TUBA4AP68366 448 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TAF13Q15543 124 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 GABRA6Q16445 453 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TEX30Q5JUR7 227 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF773Q6PK81 442 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 VHLLQ6RSH7 139 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TUBA1AQ71U36 451 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 SPATC1Q76KD6 591 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 ZNF627Q7L945 461 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 PRSS48Q7RTY5 328 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 FAM220AQ7Z4H9 259 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 DPPA2Q7Z7J5 298 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 LHFPL3Q86UP9 236 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 P2RY8Q86VZ1 359 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 SKA3Q8IX90 412 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 CCDC36Q8IYA8 594 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 KLHL36Q8N4N3 616 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 TSPAN14Q8NG11 270 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 OTOSQ8NHW6 89 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 ASB17Q8WXJ9 295 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 SGCDQ92629 289 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 MUCL1Q96DR8 90 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 WACQ9BTA9 647 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 SLC17A5Q9NRA2 495 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 CENPMQ9NSP4 180 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 CYB5R1Q9UHQ9 305 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 COPS3Q9UNS2 423 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 LAMP3Q9UQV4 416 aa10.51□□□□□ -0.73
UPF3A-210ENST00000493727 ERGIC3Q9Y282 383 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms