RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SLC17A1Q14916 467 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF674Q2M3X9 581 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF343Q6P1L6 599 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 DGAT2L6Q6ZPD8 337 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ERN2Q76MJ5 926 aaKnown RBP10.47□□□□□ -0.73
HDAC4-210ENST00000493582 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 HOGA1Q86XE5 327 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 LYPD6BQ8NI32 183 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 GNRHR2Q96P88 292 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 SLC26A1Q9H2B4 701 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 KCNJ16Q9NPI9 418 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 POLE3Q9NRF9 147 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 CA14Q9ULX7 337 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 HDGFL3Q9Y3E1 203 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 IGKV1D-42A0A075B6H8 117 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF726A6NNF4 738 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 PSG6Q00889 435 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 RHEBQ15382 184 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 TOMM34Q15785 309 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-210ENST00000493582 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-210ENST00000493582 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 PTCRAQ6ISU1 281 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF679Q8IYX0 411 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 C19orf47Q8N9M1 422 aaKnown RBP10.46□□□□□ -0.73
HDAC4-210ENST00000493582 GATSQ8NAP1 163 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 OR52R1Q8NGF1 315 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 OR4K15Q8NH41 348 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 OTOSQ8NHW6 89 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 HHIPL1Q96JK4 782 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM68Q96MH6 324 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 RAB18Q9NP72 206 aa10.46□□□□□ -0.73
HDAC4-210ENST00000493582 IGLON5A6NGN9 336 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 TCAPO15273 167 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 RAMP1O60894 148 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 CMPK1P30085 196 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 GDI1P31150 447 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.74
HDAC4-210ENST00000493582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.46□□□□□ -0.74
HDAC4-210ENST00000493582 TERB2Q8NHR7 220 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 MRPS2Q9Y399 296 aaKnown RBP10.46□□□□□ -0.74
HDAC4-210ENST00000493582 FLVCR1Q9Y5Y0 555 aa10.46□□□□□ -0.74
HDAC4-210ENST00000493582 K7EQS6 105 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CCL16O15467 120 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 B3GALT2O43825 422 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CSTAP01040 98 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CEBPBP17676 345 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 MPZP25189 248 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 DNASE1L1P49184 302 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TMEM33P57088 247 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 MGAT2Q10469 447 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 C21orf62-AS1Q17RA5 79 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 KHDC3LQ587J8 217 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 PHF19Q5T6S3 580 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 NTNG2Q96CW9 530 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 RSPRY1Q96DX4 576 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 C2orf50Q96LR7 162 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 YPEL4Q96NS1 127 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TSPAN32Q96QS1 320 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 OR8B4Q96RC9 309 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 ADAM19Q9H013 955 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 MBNL1Q9NR56 388 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 WASF3Q9UPY6 502 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TMEM14AQ9Y6G1 99 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TSTD3H0UI37 97 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TAAR5O14804 337 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 PRKNO60260 465 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BKO60814 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SFT2D2O95562 160 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TIMP1P01033 207 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BJP06899 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 FABP4P15090 132 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BOP23527 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 CRABP1P29762 137 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 FCGR2CP31995 323 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BBP33778 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BDP58876 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 PKIAP61925 76 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BCP62807 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SRSF5Q13243 272 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST2H2BEQ16778 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 TMEM184AQ6ZMB5 413 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 PNLDC1Q8NA58 520 aaKnown RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 LRRC75AQ8NAA5 344 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BHQ93079 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 GPX7Q96SL4 187 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-210ENST00000493582 NEU1Q99519 415 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 LPAR4Q99677 370 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BNQ99877 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 HIST1H2BMQ99879 126 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 SOX7Q9BT81 388 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 LRIT1Q9P2V4 623 aa10.45□□□□□ -0.74
HDAC4-210ENST00000493582 DNAJB11Q9UBS4 358 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms