RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TMED9Q9BVK6 235 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 IFT27Q9BW83 186 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC19A3Q9BZV2 496 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 CHRNA10Q9GZZ6 450 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 MMP28Q9H239 520 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 TCEAL2Q9H3H9 227 aaPredicted RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 ZCCHC4Q9H5U6 513 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 ISG20L2Q9H9L3 353 aaKnown RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 C12orf10Q9HB07 376 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 ADGRL4Q9HBW9 690 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 MCCC2Q9HCC0 563 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 FAM60AQ9NP50 221 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 B3GAT2Q9NPZ5 323 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 MEPEQ9NQ76 525 aaPredicted RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 CYSLTR2Q9NS75 346 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 RBFOX1Q9NWB1 397 aaKnown RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 PARPBPQ9NWS1 579 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 HRASLS2Q9NWW9 162 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 MRPL39Q9NYK5 338 aaKnown RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 COMMD3Q9UBI1 195 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 ST6GALNAC2Q9UJ37 374 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 KLHL21Q9UJP4 597 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 NDRG2Q9UN36 371 aaKnown RBP3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 B9D1Q9UPM9 204 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 LRP12Q9Y561 859 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 NOX1Q9Y5S8 564 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 TNFRSF18Q9Y5U5 241 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 NPTNQ9Y639 398 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 KPTNQ9Y664 436 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 F5P12259 2224 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 NINQ8N4C6 2090 aa3.37□□□□□ -1.87
ATPAF1-206ENST00000492233 ATG2AQ2TAZ0 1938 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 MYO10Q9HD67 2058 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 TRAV27A0A087WT01 109 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 A0A087WUJ7 227 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 A0A1W2PQ72 361 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SERINC4A6NH21 518 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 LILRA5A6NI73 299 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CBY3A6NI87 242 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CENPXA8MT69 81 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 NOTOA8MTQ0 251 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SMLR1H3BR10 107 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 IMPA2O14732 288 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RS1O15537 224 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 LYRM1O43325 122 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 ZNF749O43361 778 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 HCRTR1O43613 425 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 HYAL3O43820 417 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 REM1O75628 298 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 GATBO75879 557 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 NCR1O76036 304 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 OR7A10O76100 309 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 TOX4O94842 621 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 PPP1R3DO95685 299 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 IGKV1D-16P01601 117 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 HPXP02790 462 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 IFNA6P05013 189 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 FABP1P07148 127 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CSN3P07498 182 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CELA2BP08218 269 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CD3GP09693 182 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 UCHL1P09936 223 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 OR2T7P0C7T2 308 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CT45A8P0DMV1 189 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CT45A9P0DMV2 189 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SAGP10523 405 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 FGF5P12034 268 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 ST6GAL1P15907 406 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CTRB1P17538 263 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RAB4AP20338 218 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 S100A1P23297 94 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 GIFP27352 417 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 G0S2P27469 103 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SHC1P29353 583 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RBMS1P29558 406 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 PPIFP30405 207 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SSTR4P31391 388 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 UQCRFS1P47985 274 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RFX3P48380 749 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 GNG10P50151 68 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 NKX2-5P52952 324 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 EMP2P54851 167 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 ATP5J2P56134 94 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SLC37A1P57057 533 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RAB25P57735 213 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 PPP1CAP62136 330 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 BTG1P62324 171 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 RPS4XP62701 263 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 HERV-K104P63124 156 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 MAT1AQ00266 395 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 E2F1Q01094 437 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 HHEXQ03014 270 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 ZFP36L1Q07352 338 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 DLX2Q07687 328 aaPredicted RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 CRYZQ08257 329 aaKnown RBP3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 SCRN3Q0VDG4 424 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 BIKQ13323 160 aa3.36□□□□□ -1.87
ATPAF1-206ENST00000492233 FAM53BQ14153 422 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms