RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 ALG12Q9BV10 488 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 SIRPDQ9H106 197 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 PCDHAC1Q9H158 963 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 SEMA6AQ9H2E6 1030 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 POLE4Q9NR33 117 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 TUBG2Q9NRH3 451 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 PTTG3PQ9NZH4 202 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 STX18Q9P2W9 335 aaKnown RBP7.4□□□□□ -1.22
SRRM1-217ENST00000490543 TMCC3Q9ULS5 477 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 SIGLEC9Q9Y336 463 aa7.4□□□□□ -1.22
SRRM1-217ENST00000490543 NPIPB13A6NJU9 1138 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 LRRC30A6NM36 301 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 EVPLLA8MZ36 301 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 NPIPB4C9JG80 1138 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 H7C1C5 153 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 FBP2O00757 339 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SGCEO43556 437 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 DOK2O60496 412 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SHOX2O60902 331 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 TNFRSF1BP20333 461 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 GUCA1AP43080 201 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 CRYBA2P53672 197 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 ARF6P62330 175 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 LCN6P62502 163 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 DBPQ10586 325 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 MAB21L1Q13394 359 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 ALG10Q5BKT4 473 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 TNFAIP8L3Q5GJ75 292 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 CLEC12AQ5QGZ9 265 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 VAX1Q5SQQ9 334 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SFRP4Q6FHJ7 346 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 DHRS7BQ6IAN0 325 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SLC35E4Q6ICL7 350 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 GDPGP1Q6ZNW5 385 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 LRRC75AQ8NAA5 344 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SCCPDHQ8NBX0 429 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 C11orf65Q8NCR3 313 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 BHLHE23Q8NDY6 225 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 BVESQ8NE79 360 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 LIPHQ8WWY8 451 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 ZNF582Q96NG8 517 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-217ENST00000490543 TECTBQ96PL2 329 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 CENPHQ9H3R5 247 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 WDR76Q9H967 626 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 SMURF1Q9HCE7 757 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 UFSP2Q9NUQ7 469 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 CCDC167Q9P0B6 97 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 KIF17Q9P2E2 1029 aa7.39□□□□□ -1.23
SRRM1-217ENST00000490543 GMNCA6NCL1 334 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 FAM20BO75063 409 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 LIPFP07098 398 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 NR2C1P13056 603 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 MRPL19P49406 292 aaKnown RBP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 MTPNP58546 118 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 CTXN1P60606 82 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 SCRN3Q0VDG4 424 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 FHL1Q13642 323 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 MPPED2Q15777 294 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 CYP51A1Q16850 503 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 METTL11BQ5VVY1 283 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 PRAMEF6Q5VXH4 476 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 C11orf87Q6NUJ2 197 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 EPGNQ6UW88 154 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 FBXW12Q6X9E4 464 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 C1orf87Q8N0U7 546 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 BOLLQ8N9W6 283 aaKnown RBP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 TMEM239Q8WW34 195 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 DPAGT1Q9H3H5 408 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 MMADHCQ9H3L0 296 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 TOR3AQ9H497 397 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-217ENST00000490543 RIMS3Q9UJD0 308 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 FOXJ3Q9UPW0 622 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 CORO2BQ9UQ03 480 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 SH3GLB1Q9Y371 365 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
SRRM1-217ENST00000490543 A0A1B0GWJ7 208 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 OR6C6A6NF89 314 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 OR10H3O60404 316 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 IGF2P01344 180 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 FPR3P25089 353 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 TGFBR2P37173 567 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 RBM34P42696 430 aaKnown RBP7.37□□□□□ -1.23
SRRM1-217ENST00000490543 NPY4RP50391 375 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 DLX1P56177 255 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 TAS2R41P59536 307 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 STX1BP61266 288 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 HERPUD1Q15011 391 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 RSPO1Q2MKA7 263 aaPredicted RBP7.37□□□□□ -1.23
SRRM1-217ENST00000490543 CCDC92Q53HC0 331 aaPredicted RBP7.37□□□□□ -1.23
SRRM1-217ENST00000490543 CD276Q5ZPR3 534 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 Q6ZTK2 550 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 MICU2Q8IYU8 434 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 LYG1Q8N1E2 194 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 FGFRL1Q8N441 504 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 PCYOX1LQ8NBM8 494 aa7.37□□□□□ -1.23
SRRM1-217ENST00000490543 OR51A7Q8NH64 312 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms