RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TRABD2BA6NFA1 517 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 MYMKA6NI61 221 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 EFCAB9A8MZ26 197 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 HACD1B0YJ81 288 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 DFFAO00273 331 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 KPNA3O00505 521 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SYNGR1O43759 233 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CST8O60676 142 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 EIF1BO60739 113 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 HLA-HP01893 362 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZDHHC11BP0C7U3 371 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 NCK1P16333 377 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 HOXB8P17481 243 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RAB4AP20338 218 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 G0S2P27469 103 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ELK4P28324 431 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 EIF1P41567 113 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 HTR5AP47898 357 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SERPINB9P50453 376 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SNAP25P60880 206 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TSPAN5P62079 268 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 NCS1P62166 190 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PLP2Q04941 152 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF154Q13106 437 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 FADDQ13158 208 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 DGCR6Q14129 220 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 LY6DQ14210 128 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ABRAXAS2Q15018 415 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 IL17AQ16552 155 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 GPRC6AQ5T6X5 926 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CHMP1BQ7LBR1 199 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 OR2W3Q7Z3T1 314 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 WDSUB1Q8N9V3 476 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 FBXO36Q8NEA4 188 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 OR4M1Q8NGD0 313 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF431Q8TF32 576 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 MRPL48Q96GC5 212 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CELF6Q96J87 481 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SLC38A3Q99624 504 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 AGMATQ9BSE5 352 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 MED18Q9BUE0 208 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 FRMD8P1Q9BZ68 369 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PRRG4Q9BZD6 226 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 DERL2Q9GZP9 239 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TREM1Q9NP99 234 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 DYRK4Q9NR20 520 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ELOVL2Q9NXB9 296 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 FBXL12Q9NXK8 326 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 BFARQ9NZS9 450 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PRODH2Q9UF12 536 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 IKZF2Q9UKS7 526 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 EXOGQ9Y2C4 368 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CDH10Q9Y6N8 788 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PTPRSQ13332 1948 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TSC2P49815 1807 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 BAZ2BQ9UIF8 2168 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RAI1Q7Z5J4 1906 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 LOC100131303A0A0U1RQF7 123 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 METTL15A6NJ78 407 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ARHGEF33A8MVX0 844 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 EPM2AB3EWF7 344 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 KCNK1O00180 336 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CDC7O00311 574 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ACOT8O14734 319 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CDC123O75794 336 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PIAS1O75925 651 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SNHG28P0DPA3 235 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ANOS1P23352 680 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TEAD1P28347 426 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 POLR2IP36954 125 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 NBL1P41271 181 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 KIR2DS2P43631 304 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 P2RY4P51582 365 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 NR0B1P51843 470 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RIDAP52758 137 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ACLYP53396 1101 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF177Q13360 481 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 PON3Q15166 354 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ATP6AP1Q15904 470 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 GABRA6Q16445 453 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SLC18B1Q6NT16 456 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TFAP2EQ6VUC0 442 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ADAMTSL5Q6ZMM2 481 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SLC16A13Q7RTY0 426 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 CEACAM19Q7Z692 300 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 C12orf45Q8N5I9 185 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF781Q8N8C0 355 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 TTC29Q8NA56 475 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RHEBL1Q8TAI7 183 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SFT2D1Q8WV19 159 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 GTF3AQ92664 365 aaKnown RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 ZBED6CLQ96FA7 236 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 C9orf85Q96MD7 179 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RGS18Q9NS28 235 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 SCN3BQ9NY72 215 aa2.37□□□□□ -2.03
UBXN4-208ENST00000490163 RCOR3Q9P2K3 495 aaPredicted RBP2.37□□□□□ -2.03
UBXN4-208ENST00000490163 MYEF2Q9P2K5 600 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms