RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CD200P41217 278 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 RAD23AP54725 363 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 GK2Q14410 553 aaPredicted RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 CLEC12AQ5QGZ9 265 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 PRAMEF6Q5VXH4 476 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 RUSC1-AS1Q66K80 236 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 SLC18B1Q6NT16 456 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 SMARCD3Q6STE5 483 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 DCDC5Q6ZRR9 648 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 NAA40Q86UY6 237 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 LINC00346Q8IVM7 164 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 OR6V1Q8N148 313 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 CELF2-AS1Q8N7Q2 184 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 SLC26A10Q8NG04 563 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 Q8TCH9 128 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 C7orf34Q96L11 122 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 DHRS1Q96LJ7 313 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 ERMAPQ96PL5 475 aaPredicted RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 FUZQ9BT04 418 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 SRA1Q9HD15 236 aaKnown RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 KRCC1Q9NPI7 259 aaPredicted RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 ARGLU1Q9NWB6 273 aaPredicted RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 FAM32AQ9Y421 112 aaKnown RBP10.32□□□□□ -0.76
CPSF3-204ENST00000489403 MMP24Q9Y5R2 645 aa10.32□□□□□ -0.76
CPSF3-204ENST00000489403 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 SRRM5B3KS81 715 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 F5H5K5 113 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 HIST1H1CP16403 213 aaKnown RBP10.31□□□□□ -0.76
CPSF3-204ENST00000489403 PSMB10P40306 273 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 MPPED2Q15777 294 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 GPR157Q5UAW9 335 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 FAM86B1Q8N7N1 296 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 OR52J3Q8NH60 311 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 FANK1Q8TC84 345 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 WFDC12Q8WWY7 111 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 ERGIC1Q969X5 290 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 NMNAT3Q96T66 252 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 PITX2Q99697 317 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 ATF6BQ99941 703 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 KCTD14Q9BQ13 255 aaPredicted RBP10.31□□□□□ -0.76
CPSF3-204ENST00000489403 OR52D1Q9H346 318 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 PNRC2Q9NPJ4 139 aaKnown RBP10.31□□□□□ -0.76
CPSF3-204ENST00000489403 TNFRSF19Q9NS68 423 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 UFSP2Q9NUQ7 469 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 ABCD2Q9UBJ2 740 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 TMCC3Q9ULS5 477 aa10.31□□□□□ -0.76
CPSF3-204ENST00000489403 ARPC3O15145 178 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
CPSF3-204ENST00000489403 RENP00797 406 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 KNG1P01042 644 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 SFTPBP07988 381 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 MMP9P14780 707 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 CFHR2P36980 270 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 NUDT2P50583 147 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 RELBQ01201 579 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 SRSF4Q08170 494 aaKnown RBP10.3□□□□□ -0.76
CPSF3-204ENST00000489403 TRAP1Q12931 704 aaKnown RBP10.3□□□□□ -0.76
CPSF3-204ENST00000489403 MALLQ13021 153 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
CPSF3-204ENST00000489403 HACD2Q6Y1H2 254 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 Q6YL49 198 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 ZBTB46Q86UZ6 589 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 OR11L1Q8NGX0 322 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 OR4K13Q8NH42 304 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 SLCO4A1Q96BD0 722 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 TECTBQ96PL2 329 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 PCGF1Q9BSM1 259 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 FN3KQ9H479 309 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 MARCH7Q9H992 704 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 EFCAB1Q9HAE3 211 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 RPRD1BQ9NQG5 326 aaKnown RBP10.3□□□□□ -0.76
CPSF3-204ENST00000489403 CYB5R1Q9UHQ9 305 aa10.3□□□□□ -0.76
CPSF3-204ENST00000489403 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 NDUFAB1O14561 156 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 LCATP04180 440 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 ANOS1P23352 680 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 SLC6A6P31641 620 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 GGT2P36268 569 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 NPY4RP50391 375 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 RAG2P55895 527 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 BPIFB3P59826 476 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 OR8G1Q15617 311 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 RFX4Q33E94 735 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 SLC36A3Q495N2 470 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 MIDNQ504T8 468 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 ZNF362Q5T0B9 420 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 SFRP4Q6FHJ7 346 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 GLYATQ6IB77 296 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 PGAP1Q75T13 922 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 MRPL21Q7Z2W9 205 aaKnown RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 SDR9C7Q8NEX9 313 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 ADAT1Q9BUB4 502 aaKnown RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 CHIAQ9BZP6 476 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 MMADHCQ9H3L0 296 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 CCDC134Q9H6E4 229 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 BEX1Q9HBH7 125 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms