RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CD83Q01151 205 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 RPL18Q07020 188 aaKnown RBP7.43□□□□□ -1.22
SSBP1-212ENST00000489378 OR8B8Q15620 311 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 KCNJ8Q15842 424 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 DHRS4L2Q6PKH6 230 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 FBXW12Q6X9E4 464 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ADAMTSL5Q6ZMM2 481 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 BBS10Q8TAM1 723 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 DPF1Q92782 380 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ECSITQ9BQ95 431 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 DCTN5Q9BTE1 182 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 RAB18Q9NP72 206 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 SLCO1B3Q9NPD5 702 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 ZNF229Q9UJW7 825 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 PYCARDQ9ULZ3 195 aa7.43□□□□□ -1.22
SSBP1-212ENST00000489378 PRSS47A8MTI9 375 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 IQCF6A8MYZ5 107 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 FBP2O00757 339 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 DOK2O60496 412 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-212ENST00000489378 FMO6PO60774 539 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 LYPD3O95274 346 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 THY1P04216 161 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 HIST1H2ABP04908 130 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 COX5BP10606 129 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 UMPSP11172 480 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 ETS2P15036 469 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 FPR3P25089 353 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 ELF3P78545 371 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-212ENST00000489378 CD47Q08722 323 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 TCTEX1D4Q5JR98 221 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 TRMT10CQ7L0Y3 403 aaKnown RBP7.42□□□□□ -1.22
SSBP1-212ENST00000489378 HIST3H2AQ7L7L0 130 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 NANOGNBQ7Z5D8 188 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 FAM90A1Q86YD7 464 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 SLC30A8Q8IWU4 369 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 OR51G2Q8NGK0 314 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 PIFOQ8TCI5 191 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 HIST1H2ACQ93077 130 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 MPP4Q96JB8 637 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 CDCA4Q9BXL8 241 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 FAM234AQ9H0X4 552 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 EMC7Q9NPA0 242 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 TMEM100Q9NV29 134 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 RNF7Q9UBF6 113 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 ANGPT4Q9Y264 503 aa7.42□□□□□ -1.22
SSBP1-212ENST00000489378 LSM4Q9Y4Z0 139 aaKnown RBP7.42□□□□□ -1.22
SSBP1-212ENST00000489378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 A0A1W2PPL8 197 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 C12orf71A8MTZ7 269 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 DBHP09172 617 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 ALDOCP09972 364 aaKnown RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 AQP2P41181 271 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 DAP3P51398 398 aaKnown RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 UBE2E1P51965 193 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 INTS11Q5TA45 600 aaKnown RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 HHATQ5VTY9 493 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 CCDC121Q6ZUS5 278 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 FOXL2NBQ6ZUU3 175 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 CMTM4Q8IZR5 234 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 C17orf53Q8N3J3 647 aaPredicted RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 LINC00482Q8N8I6 264 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 DTX3Q8N9I9 347 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 Q8NFD4 153 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 MOSPD2Q8NHP6 518 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 C8orf46Q8TAG6 207 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 AENQ8WTP8 325 aaKnown RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 ERGIC1Q969X5 290 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 COG8Q96MW5 612 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 ZIM3Q96PE6 472 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 WDR76Q9H967 626 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 INIPQ9NRY2 104 aa7.41□□□□□ -1.22
SSBP1-212ENST00000489378 THUMPD1Q9NXG2 353 aaKnown RBP7.41□□□□□ -1.22
SSBP1-212ENST00000489378 IGHV3OR15-7A0A075B7D8 119 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 TRAV38-1A0A0B4J264 116 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 SMIM23A6NLE4 172 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 C5orf58C9J3I9 102 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 H0YHG0 523 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 SGCEO43556 437 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 NDUFA2O43678 99 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 ITM2AO43736 263 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 CHP2O43745 196 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 SHBGP04278 402 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-212ENST00000489378 LBPP18428 481 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 RAB6AP20340 208 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 MSR1P21757 451 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 CD200P41217 278 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 RGS6P49758 472 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 LRRC74AQ0VAA2 488 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 RGNQ15493 299 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 GFOD2Q3B7J2 385 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 OTPQ5XKR4 325 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 HCP5Q6MZN7 132 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 ZNF613Q6PF04 617 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms