RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SPRYD4Q8WW59 207 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-233ENST00000489352 ACOT11Q8WXI4 607 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-233ENST00000489352 TMEM19Q96HH6 336 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 HEXA-AS1Q9H8Q6 139 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 KCNK9Q9NPC2 374 aa9.22□□□□□ -0.93
HDAC6-233ENST00000489352 SEC14L6B5MCN3 397 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 LDLRAD4O15165 306 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 GRPP07492 148 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 MSR1P21757 451 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 SERPINB5P36952 375 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 DSTNP60981 165 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 EMX2Q04743 252 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 MAPK11Q15759 364 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF74Q16587 644 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 DPY19L1Q2PZI1 675 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 WDR38Q5JTN6 314 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 FAM216BQ8N7L0 139 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 PLPP7Q8NBV4 271 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 KLHL30-AS1Q8NEE0 82 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 OR9Q1Q8NGQ5 310 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 ASB10Q8WXI3 467 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 APOBEC3DQ96AK3 386 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-233ENST00000489352 DUS3LQ96G46 650 aaKnown RBP9.21□□□□□ -0.94
HDAC6-233ENST00000489352 WACQ9BTA9 647 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 FUT8Q9BYC5 575 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 WDR76Q9H967 626 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 THUMPD1Q9NXG2 353 aaKnown RBP9.21□□□□□ -0.94
HDAC6-233ENST00000489352 BTNL2Q9UIR0 455 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 KCNG2Q9UJ96 466 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF229Q9UJW7 825 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 SLC13A4Q9UKG4 626 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 EMCNQ9ULC0 261 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 ANGPT4Q9Y264 503 aa9.21□□□□□ -0.94
HDAC6-233ENST00000489352 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-233ENST00000489352 IGKV1D-43A0A0B4J1Z2 117 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 A0A0B4J2E0 115 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1B0GX12 115 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 NKX6-3A6NJ46 265 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 IFNA6P05013 189 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 DUX4L4P0CJ87 422 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 MUC1P15941 1255 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-233ENST00000489352 CDH12P55289 794 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 RGS8P57771 180 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SPANXN4Q5MJ08 99 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
HDAC6-233ENST00000489352 FAM27D1Q5T7N8 215 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 TEX36Q5VZQ5 186 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 TTC33Q6PID6 262 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-233ENST00000489352 C10orf107Q8IVU9 208 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 GCSAMQ8N6F7 178 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SLC26A10Q8NG04 563 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SLC7A6Q92536 515 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 AKR1E2Q96JD6 320 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 P2RX4Q99571 388 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SEPHS2Q99611 448 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 SLC22A4Q9H015 551 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 INIPQ9NRY2 104 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 C5orf58C9J3I9 102 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 KPNA4O00629 521 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 LPLP06858 475 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 VIMP08670 466 aaKnown RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 NDUFB7P17568 137 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 CA6P23280 308 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 PRKAR1BP31321 381 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 CEBPDP49716 269 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 CLNS1AP54105 237 aaKnown RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 RPL23AP62750 156 aaKnown RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 MZT1Q08AG7 82 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 ENDOGQ14249 297 aaKnown RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 SLC25A47Q6Q0C1 308 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 C10orf99Q6UWK7 81 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 ZNF826PQ6ZT77 177 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 FNDC8Q8TC99 324 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 TESCQ96BS2 214 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 FOXRED1Q96CU9 486 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 ADAT1Q9BUB4 502 aaKnown RBP9.19□□□□□ -0.94
HDAC6-233ENST00000489352 SLCO1B3Q9NPD5 702 aa9.19□□□□□ -0.94
HDAC6-233ENST00000489352 hCG_1809904A0A1W2PP81 198 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1W2PPE2 198 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1W2PR64 198 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 A0A1W2PRV1 198 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 PSMB11A5LHX3 300 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 CCL24O00175 119 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 GMDSO60547 372 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 CHRNGP07510 517 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 BGNP21810 368 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 AZGP1P25311 298 aaKnown RBP9.18□□□□□ -0.94
HDAC6-233ENST00000489352 GRK5P34947 590 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 GGT2P36268 569 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 CCT5P48643 541 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 UGT2B15P54855 530 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 LRRC74AQ0VAA2 488 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 MALLQ13021 153 aa9.18□□□□□ -0.94
HDAC6-233ENST00000489352 SSX2Q16385 188 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms