RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SLC17A4Q9Y2C5 497 aa13.33□□□□□ -0.28
EPHB4-206ENST00000487222 POLDIP2Q9Y2S7 368 aa13.33□□□□□ -0.28
EPHB4-206ENST00000487222 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 HS3ST1O14792 307 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 RNF4P78317 190 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 EDDM3AQ14507 147 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 GALNT16Q8N428 558 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 WDFY2Q96P53 400 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 PLSCR3Q9NRY6 295 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 LOXHD1Q8IVV2 1947 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 SLC17A2O00624 439 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 OR2C1O95371 312 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 GALP22466 123 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 SHBQ15464 509 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF239Q16600 458 aaKnown RBP13.32□□□□□ -0.28
EPHB4-206ENST00000487222 YRDCQ86U90 279 aaKnown RBP13.32□□□□□ -0.28
EPHB4-206ENST00000487222 BSCL2Q96G97 398 aaPredicted RBP13.32□□□□□ -0.28
EPHB4-206ENST00000487222 TXN2Q99757 166 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 H7BYZ3 331 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 OR5H8P0DN80 308 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 CDK5Q00535 292 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 GPNMBQ14956 572 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 TMPRSS11FQ6ZWK6 438 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 C12orf49Q9H741 205 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 UBE2ZQ9H832 354 aaPredicted RBP13.32□□□□□ -0.28
EPHB4-206ENST00000487222 NIT2Q9NQR4 276 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 LANCL2Q9NS86 450 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 HIF1ANQ9NWT6 349 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 BHLHE40O14503 412 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 NRASP01111 189 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 IL5P05113 134 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 PTAFRP25105 342 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 C17orf107Q6ZR85 190 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 SMIM15Q7Z3B0 74 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 GPX8Q8TED1 209 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 ORAI1Q96D31 301 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 DOK1Q99704 481 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
EPHB4-206ENST00000487222 MRPS2Q9Y399 296 aaKnown RBP13.32□□□□□ -0.28
EPHB4-206ENST00000487222 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 PI3P19957 117 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 OPRM1P35372 400 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 OR8B8Q15620 311 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 LINC00303Q3SY05 128 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
EPHB4-206ENST00000487222 PRDM7Q9NQW5 492 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 MED9Q9NWA0 146 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 RNF150Q9ULK6 438 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 PPIL1Q9Y3C6 166 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 NKX6-3A6NJ46 265 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 C1QAP02745 245 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 SELEP16581 610 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 IL3RAP26951 378 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 SLC10A1Q14973 349 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 ZBTB37Q5TC79 503 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 PPP1R1CQ8WVI7 109 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 WDR89Q96FK6 387 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-206ENST00000487222 ING1Q9UK53 422 aaPredicted RBP13.31□□□□□ -0.28
EPHB4-206ENST00000487222 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 XRCC2O43543 280 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 NPBWR1P48145 328 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 RAE1P78406 368 aaKnown RBP13.31□□□□□ -0.28
EPHB4-206ENST00000487222 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 A0A087WUJ7 227 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 PPM1DO15297 605 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 SRFP11831 508 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 TMEM196Q5HYL7 178 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 TMEM268Q5VZI3 342 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 DTWD2Q8NBA8 298 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 TMEM229BQ8NBD8 167 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 OSGIN2Q9Y236 505 aa13.31□□□□□ -0.28
EPHB4-206ENST00000487222 hCG_1809904A0A1W2PP81 198 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 A0A1W2PPE2 198 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 A0A1W2PR64 198 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 A0A1W2PRV1 198 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SERTM1A2A2V5 107 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 HMGA2P52926 109 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 DND1Q8IYX4 353 aaKnown RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 POMT2Q9UKY4 750 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SIGLEC7Q9Y286 467 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 CD37P11049 281 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 SUMO3P55854 103 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 PRAMEF5Q5TYX0 476 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 PRAMEF6Q5VXH4 476 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 ZNF626Q68DY1 528 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 TEX261Q6UWH6 196 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 BHLHA9Q7RTU4 235 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 THOC3Q96J01 351 aaKnown RBP13.3□□□□□ -0.28
EPHB4-206ENST00000487222 FOXJ3Q9UPW0 622 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 U3KQ87 197 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 KCNE1BA0A087WTH5 132 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 FAM166BA8MTA8 275 aa13.3□□□□□ -0.28
EPHB4-206ENST00000487222 GLULP15104 373 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms