RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 ZNF583Q96ND8 569 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 MMADHCQ9H3L0 296 aaPredicted RBP12.25□□□□□ -0.45
PFDN4-204ENST00000487129 TOR3AQ9H497 397 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 ERVK-18Q9QC07 812 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 ATPIF1Q9UII2 106 aa12.25□□□□□ -0.45
PFDN4-204ENST00000487129 MEGF11A6BM72 1044 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 RER1O15258 196 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 OR10H3O60404 316 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 SHOX2O60902 331 aaPredicted RBP12.24□□□□□ -0.45
PFDN4-204ENST00000487129 CTLA4P16410 223 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 FPR3P25089 353 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 RGS6P49758 472 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 SFRP4Q6FHJ7 346 aaPredicted RBP12.24□□□□□ -0.45
PFDN4-204ENST00000487129 ERICH5Q6P6B1 374 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 FGFRL1Q8N441 504 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 GALNT4Q8N4A0 578 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 C11orf44Q8N8P7 122 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 PPP1R35Q8TAP8 253 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 ERGIC1Q969X5 290 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 WDR76Q9H967 626 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 UFSP2Q9NUQ7 469 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 FOXJ3Q9UPW0 622 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 MED31Q9Y3C7 131 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 CAPN7Q9Y6W3 813 aa12.24□□□□□ -0.45
PFDN4-204ENST00000487129 TRAV27A0A087WT01 109 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 A6NIZ1 184 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 LGALS8O00214 317 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 ADAM20O43506 726 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 PTBP3O95758 552 aaKnown RBP12.23□□□□□ -0.45
PFDN4-204ENST00000487129 ZNF26P17031 533 aaPredicted RBP12.23□□□□□ -0.45
PFDN4-204ENST00000487129 TAS2R41P59536 307 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 RAP1BP61224 184 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 RAP1AP62834 184 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 MESTQ5EB52 335 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 METAP1DQ6UB28 335 aaPredicted RBP12.23□□□□□ -0.45
PFDN4-204ENST00000487129 Q6ZTK2 550 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 BTN2A1Q7KYR7 527 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 VMO1Q7Z5L0 202 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 RP9Q8TA86 221 aaKnown RBP12.23□□□□□ -0.45
PFDN4-204ENST00000487129 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
PFDN4-204ENST00000487129 PHF21AQ96BD5 680 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 BPIFA2Q96DR5 249 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 TMEM100Q9NV29 134 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 BAG5Q9UL15 447 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 SH3GLB1Q9Y371 365 aa12.23□□□□□ -0.45
PFDN4-204ENST00000487129 TEX13CA0A0J9YWL9 993 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 RNASEK-C17orf49H0YIS7 233 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 CCDC22O60826 627 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 IFNA14P01570 189 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 FBP1P09467 338 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 IRF2P14316 349 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 GABRA5P31644 462 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 DLX1P56177 255 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
PFDN4-204ENST00000487129 KRTAP27-1Q3LI81 207 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 CDONQ4KMG0 1287 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 FAM122BQ7Z309 247 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 FAM90A1Q86YD7 464 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 MICU2Q8IYU8 434 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 OR5L1Q8NGL2 311 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 OR11L1Q8NGX0 322 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 OR51A7Q8NH64 312 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 POLR2J2Q9GZM3 115 aaKnown RBP12.22□□□□□ -0.45
PFDN4-204ENST00000487129 POLR2J3Q9H1A7 115 aaKnown RBP12.22□□□□□ -0.45
PFDN4-204ENST00000487129 RPUSD1Q9UJJ7 312 aaKnown RBP12.22□□□□□ -0.45
PFDN4-204ENST00000487129 ADAM18Q9Y3Q7 739 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 KPTNQ9Y664 436 aa12.22□□□□□ -0.45
PFDN4-204ENST00000487129 A0A1B0GW55 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 ELOVL7A1L3X0 281 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DVL1O14640 695 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 IMPA2O14732 288 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L2P0CJ85 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L3P0CJ86 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L4P0CJ87 422 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L5P0CJ88 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L6P0CJ89 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L7P0CJ90 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 IFI30P13284 250 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 KDELR2P33947 212 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.45
PFDN4-204ENST00000487129 HIST1H3AP68431 136 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 GK2Q14410 553 aaPredicted RBP12.21□□□□□ -0.45
PFDN4-204ENST00000487129 C11orf91Q3C1V1 193 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 HIST2H3PS2Q5TEC6 136 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4L9Q6RFH8 374 aaPredicted RBP12.21□□□□□ -0.45
PFDN4-204ENST00000487129 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 HIST2H3AQ71DI3 136 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 FAM156AQ8NDB6 213 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 Q96M85 177 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 PPA2Q9H2U2 334 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 DUX4Q9UBX2 424 aa12.21□□□□□ -0.45
PFDN4-204ENST00000487129 FAM96BQ9Y3D0 163 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms