RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 PRR32B1ATL7 298 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 F5H5K5 113 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 M0R135 149 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 LYNP07948 512 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 ALOX5APP20292 161 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 TUBG1P23258 451 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 OPRL1P41146 370 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 MMP15P51511 669 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 HCCSP53701 268 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 CDC42P60953 191 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 ALKBH6Q3KRA9 238 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 SPATC1Q76KD6 591 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 RHOUQ7L0Q8 258 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 RFLNBQ8N5W9 214 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 PACRGLQ8N7B6 248 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 APOBEC3DQ96AK3 386 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 ZNF799Q96GE5 643 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 ZNF582Q96NG8 517 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 KCNJ15Q99712 375 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 VRK1Q99986 396 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 COPS4Q9BT78 406 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 YIPF3Q9GZM5 350 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 DYNLRB1Q9NP97 96 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 TUBG2Q9NRH3 451 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 FAM118AQ9NWS6 357 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 SMPD3Q9NY59 655 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 DNAJC27Q9NZQ0 273 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
SSR4-211ENST00000486204 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
SSR4-211ENST00000486204 SLC16A6O15403 523 aa11□□□□□ -0.65
SSR4-211ENST00000486204 SSX4O60224 188 aa11□□□□□ -0.65
SSR4-211ENST00000486204 ADRA2AP08913 450 aa11□□□□□ -0.65
SSR4-211ENST00000486204 KITLGP21583 273 aa11□□□□□ -0.65
SSR4-211ENST00000486204 GCH1P30793 250 aa11□□□□□ -0.65
SSR4-211ENST00000486204 HTR1FP30939 366 aa11□□□□□ -0.65
SSR4-211ENST00000486204 EFNA4P52798 201 aa11□□□□□ -0.65
SSR4-211ENST00000486204 NUDT6P53370 316 aa11□□□□□ -0.65
SSR4-211ENST00000486204 TPTEP56180 551 aa11□□□□□ -0.65
SSR4-211ENST00000486204 SNRPGP62308 76 aaKnown RBP11□□□□□ -0.65
SSR4-211ENST00000486204 GRB2P62993 217 aaKnown RBP11□□□□□ -0.65
SSR4-211ENST00000486204 PSG7Q13046 419 aa11□□□□□ -0.65
SSR4-211ENST00000486204 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
SSR4-211ENST00000486204 SLC25A30Q5SVS4 291 aa11□□□□□ -0.65
SSR4-211ENST00000486204 DRAM2Q6UX65 266 aa11□□□□□ -0.65
SSR4-211ENST00000486204 FBXW12Q6X9E4 464 aa11□□□□□ -0.65
SSR4-211ENST00000486204 PRSS45Q7RTY3 260 aa11□□□□□ -0.65
SSR4-211ENST00000486204 ENTHD1Q8IYW4 607 aa11□□□□□ -0.65
SSR4-211ENST00000486204 TRUB1Q8WWH5 349 aaKnown RBP11□□□□□ -0.65
SSR4-211ENST00000486204 SPTSSAQ969W0 71 aa11□□□□□ -0.65
SSR4-211ENST00000486204 COG8Q96MW5 612 aa11□□□□□ -0.65
SSR4-211ENST00000486204 CNN2Q99439 309 aaKnown RBP11□□□□□ -0.65
SSR4-211ENST00000486204 SHARPINQ9H0F6 387 aa11□□□□□ -0.65
SSR4-211ENST00000486204 TPK1Q9H3S4 243 aa11□□□□□ -0.65
SSR4-211ENST00000486204 C8orf4Q9NR00 106 aa11□□□□□ -0.65
SSR4-211ENST00000486204 CENPMQ9NSP4 180 aa11□□□□□ -0.65
SSR4-211ENST00000486204 TMEM160Q9NX00 188 aa11□□□□□ -0.65
SSR4-211ENST00000486204 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
SSR4-211ENST00000486204 PTTG3PQ9NZH4 202 aa11□□□□□ -0.65
SSR4-211ENST00000486204 TAAR3PQ9P1P4 343 aa11□□□□□ -0.65
SSR4-211ENST00000486204 AASSQ9UDR5 926 aa11□□□□□ -0.65
SSR4-211ENST00000486204 WARS2Q9UGM6 360 aaKnown RBP11□□□□□ -0.65
SSR4-211ENST00000486204 GMPPBQ9Y5P6 360 aa11□□□□□ -0.65
SSR4-211ENST00000486204 LOC100130705A0A1B0GUX0 176 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 ZSCAN5BA6NJL1 495 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 ENTPD6O75354 484 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 NCR1O76036 304 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 SBK2P0C263 348 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 SLC2A1P11166 492 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 NAT2P11245 290 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 PRKXP51817 358 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 HLXQ14774 488 aaPredicted RBP10.99□□□□□ -0.65
SSR4-211ENST00000486204 OCLNQ16625 522 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 NKPD1Q17RQ9 610 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 LRRN1Q6UXK5 716 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 GALNT4Q8N4A0 578 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 ZNF525Q8N782 197 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 HAVCR1Q96D42 359 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 SLCO1C1Q9NYB5 712 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 H2AFY2Q9P0M6 372 aaPredicted RBP10.99□□□□□ -0.65
SSR4-211ENST00000486204 PURGQ9UJV8 347 aaKnown RBP10.99□□□□□ -0.65
SSR4-211ENST00000486204 LRP12Q9Y561 859 aa10.99□□□□□ -0.65
SSR4-211ENST00000486204 C17orf100A8MU93 164 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 APOL3O95236 402 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 LCATP04180 440 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 RAC2P15153 192 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 SLC15A1P46059 708 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 SLC6A9P48067 706 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 CX3CR1P49238 355 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 PRSS12P56730 875 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 SELENOVP59797 346 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 ROM1Q03395 351 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 TMED1Q13445 227 aa10.98□□□□□ -0.65
SSR4-211ENST00000486204 GK2Q14410 553 aaPredicted RBP10.98□□□□□ -0.65
SSR4-211ENST00000486204 LIPNQ5VXI9 398 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms